Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0529 ATGCAGGTTTGTCTAGCAATCAACAAAGAGGCATTTTCACAAACACTTCCCGTACAAACAAATCCTTTCACTCCTAGATCCTCACTGGTTCGTTACTGGAAAACCCATGTCTCCAGCAACCTCTCAGTCCCGCAATTCCTGCTTGCAAGAGCCTCCCCCCTCTCCCCTCATGACTACGCTTTCTTCAAAAAGCTCGTCTCCCAAAAAGCCCTCTCTTCACGCTACGATTCACTTTGCTCCTTAGCCAATTTGTACTGCTCGTTCGATTCATCCCCACTACTTTCCGATGCAACCAATCGCACCAGCAATAACGACGCCAACTTCGCCATCTACTCCAACAAACAATTTACAAACTACGGATCGTCTCAAGTCGGCGGAGTCAAATCGTTCAAGAACTACTCAGGCGGATTGAACAACATCAACGATTCGTTCAAAAAATACAACCCAGGCTCGACCCGCCAAAACGAGCGGTTCACGAACTACGCAGAGAACGGCAATGTAGCAGATACCGGCTTCACCAGTTACGGGGTCGGAGCCACCTCCGGTTCCGGTAGCTTCAACAACTACGACAAGCTTGTCAACGTTCCCAATCTCCGATTCACTTCCTACAACCCCGGGGCCGACAACCGCCAGCTGTCATTCTCCAGCTATGGCAATGAGACCAACTCTGGTACCCAATCGTTCGCGAGTTACGGCAAGAAAGGTCAAGCGGGACCCAGGGATTTCACTAACTACGCGGTTAGCGCCAATATACTGCAATCCGACTTCACGGGTTATGGCGAGTCGGGAAGAAGAGCAAACGACACCTTTAAATCCTACGCTTCTTCGGGTAACAACCCGAAAGCCACTTTCAAATTCTACGGCACCGGGTCTGTATCCGGATCCCAAGCATTCACGAGTTACCGGAACGGTGCGAATGTGGGCGATGATTCCTTCCAGAGTTATGCCACAAAATCTAGCTCGAGCTCGGAGAGTTTCGAGAACTACGGGCAATCGTTCAACGTTGGCAACGATACCTTCAAGGAATACGGCAAGGGAGCCGTGGGTCGGACCACGATCGGTTTCAAGACATACGGTTTGGGTCGGACGTTCAAAGATTATGCCAAGCGGGGCGTGTCGTTTTCGGGGTATCGTAATTTCAGCGGATCCAGTGGCAGATTGGTAAATAAATGGGTGGAGCCGGGCAAATTTTTCAGGGAGTCCACTATCAAGGAAGGAAATGTTATGGCGATGCCCGACATAAGAGACAAGATGCCTGCACGGTCGTTTTTGCCCGAGGCTCTTTCCTCAAAATTACCATTCTTGTCGTCATCGCTGGGCGAGATCAAGGAAGTGTTTCACGCGCGAGATGGGTCGGCGATGGAGCGCGTGATCGTGCAGACCTTAGAAGAGTGCGAGAGGTCTCCGAGCCGAGGCGAGACGAAACGGTGCGTAGGGTCAGGGGAAGCCATGATACAGTTCGCGGTGTCCGTGCTGGGACCCAAGGTGGTGGTGAGGACCACCGAGAACGTGAAGGGGTCAAGCACGAGCGTGATGATCGGGAAAGTCAGAACGATCAACGGTGGAAAGGTGACGAAATCAGTTTCTTGCCATCAAAGTTTGTACCCGTACCTAGTGTATTATTGTCACTCTGTCCCCAACGTAAGAGTGCATGAAGCTGATATACTCGACGTAGACTCAAAGGTAAGGATCAATCATGGGGTTGCCATATGTCATCTGGACACGTCAGCATGGGGCCCCACGCATGGCGCCTTCGTGGCCCTGGGGTCCGCTCCTGGGAAAATCGAAGCGTGTCACTGGATCTTCGAGAACGACGTGACGTGGACCACCGCCGATTGA 1839 0.5188 MQVCLAINKEAFSQTLPVQTNPFTPRSSLVRYWKTHVSSNLSVPQFLLARASPLSPHDYAFFKKLVSQKALSSRYDSLCSLANLYCSFDSSPLLSDATNRTSNNDANFAIYSNKQFTNYGSSQVGGVKSFKNYSGGLNNINDSFKKYNPGSTRQNERFTNYAENGNVADTGFTSYGVGATSGSGSFNNYDKLVNVPNLRFTSYNPGADNRQLSFSSYGNETNSGTQSFASYGKKGQAGPRDFTNYAVSANILQSDFTGYGESGRRANDTFKSYASSGNNPKATFKFYGTGSVSGSQAFTSYRNGANVGDDSFQSYATKSSSSSESFENYGQSFNVGNDTFKEYGKGAVGRTTIGFKTYGLGRTFKDYAKRGVSFSGYRNFSGSSGRLVNKWVEPGKFFRESTIKEGNVMAMPDIRDKMPARSFLPEALSSKLPFLSSSLGEIKEVFHARDGSAMERVIVQTLEECERSPSRGETKRCVGSGEAMIQFAVSVLGPKVVVRTTENVKGSSTSVMIGKVRTINGGKVTKSVSCHQSLYPYLVYYCHSVPNVRVHEADILDVDSKVRINHGVAICHLDTSAWGPTHGAFVALGSAPGKIEACHWIFENDVTWTTAD 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0529 612 ProSiteProfiles BURP domain profile. 397 611 IPR004873 -
Lele19g0529 612 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 17 612 - -
Lele19g0529 612 SMART BURP_2 395 611 IPR004873 -
Lele19g0529 612 Pfam BURP domain 397 609 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0529 Lele-ChrLele19 3076682 3078520 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1027 17 20932767 20935282 Lele19g0529 19 3076682 3078520 hybridization
Lele18g0508 18 3017755 3019925 Lele19g0529 19 3076682 3078520 hybridization