Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1027 ATGCAATGCCCGCTGTGTAGTATGAGTGGCTGGCTAAACATATTAGTGTATGCTCCAGACCGGGCGTCTATTTATTCTTCATTGGCCTCGTCGCTTCTCCCTGCCATTTTCACACAGCTCAACATGAGTATTCAATTCATCCTCCTTTTCTTGTCGTTCTCATCTTTCCATGTTTGTCTAGCAATCAACAAAGAGGCATTTACACAAACACTTCCCGTACAAACAAATCCTTTCACTCCTAGATCCTCACTGGTTCGTTACTGGAAAACCCATGTCTCCAGCAACCTCCCAGTCCCGCAATTCCTGCTTGCAAGAGCCTCCCCTCTCTCCCCTCATGACTACGCCTTCTTCAAAAAGCTCGTTTCCCAAAAAGCACTCTCGTCACGCTACGATTCACTTTGCTCCTTAGCCAATTTGTACTGCTCGTTCGACTCATCACCACAACTTTCCGATGCAACCAATCGCACCCACAATAACGACGCCAACTTCGCCATCTACTCCAACAAACAATTTACAAACTACGGCTCGTCTCAAGTCGGCGGAGTCAATTCGTTCAAGAACTACTCAGGCGGATTGAACAACATCAACGATTCGTTCAAAAAATACAACCCAGGCTCGACCAGCCAAAACGAGCGGTTCACGAACTACGCAGAAAATGGCAATGTAGCAGATACCGGCTTCACCAGTTACGGGGTCGGAGCCACCTCCGGCTCCGGTAGCTTCAACAACTACGACAAGCTTGTCAACGTTCCCAATCTCCGATTCACTTCCTACAACCCCGGGGCCGACAACCGCCAGCTGTCATTCTCCAGCTATGGCAATGAGACCAACTCTGGTACCCAATCGTTCGCGAGTTACGGCAAGAAAGGTCAAGCGGGACCCAGGGATTTCACTAACTACGCGGTTAGCGCCAATATACTGCAATCCGACTTCACTGGTTATGGCGAGTCGGGAAGAAGAGCAAACGAAACCTTTAAATCCTACGCTTCTTCGGGTAACAACCCGAAAGCCACTTTCAAATTCTACGGCACCGGGTCTGTATTCGGATCCCAAGCATTCACGAGTTACCGGAACGGTGCGAATGTGGGCGATGATTCCTTCCAGAGTTATGCTGCAAAATCTAGCTCAAGCTCAGCGAGTTTCGAGAACTACGGGCAATCGTTCAACGTTGGCAACGATACCTTCAAGGAATACGGCAAGGGAGCCGTGGGTCGGACCACGATCGGTTTCAAGACATACGGTTTGGGTCGGACGTTCAAAGATTATGCCAAGCAGGGCGTGTCGTTTTCTGGGTATCGTAATTTCAGCGGGTCCAGTGGCAGATTAGTAAATAAATGGGTGGAGCCGGGCAAATTTTTTAGGGAGTCCACGATCAAGGAAGGAAATGTTATGGCGATGCCCGACATAAGAGACAAGATGGCTGCAAGGTCGTTTTTGCCCGAGGCTCTTTCATCAAAATTACCATTCTCATCGGCATCGCTGGGCGAGATCAAGGAAGTGTTTCACGCGCGTGATGGGTCGGCGATGGAGCGCGTGATCTTGCAGGCCTTAGAAGAGTGCGAGAGGGCTCCTAGCCGAGGCGAGACGAAACGGTGCGTAGGGTCAGGGGAAGCCATGATACAGTTCGCGGTGTCCGTGCTGGGACCCAAGGTGGTGGTAAGGAGCACCGAGAACGTGAAGGGGTCAAGCACGCGCGTGATGATCGGGAAAGTCAGAACGATCAACGGTGGAAAGGTGACGAAATCAGTTTCTTGCCATCAAAGTTTGTACCCGTACCTAGTGTATTATTGTCACTCTGTCCCCCACGTAAGAGTGTATGAAGCTGATATTCTCGACGTAGACTCAAAGGTAAGGATCAATCATGGGGTTGCCATATGTCATCTGGACACGTCAGCATGGGGCCCCACGCATGGCGCCTTCGTGGCCCTGGGGTCCGCTCCTGGGAAAATCGAAGCGTGTCACTGGATCTTCGAGAACGACGTGACGTGGACCACCGCCGATTGA 2004 0.509 MQCPLCSMSGWLNILVYAPDRASIYSSLASSLLPAIFTQLNMSIQFILLFLSFSSFHVCLAINKEAFTQTLPVQTNPFTPRSSLVRYWKTHVSSNLPVPQFLLARASPLSPHDYAFFKKLVSQKALSSRYDSLCSLANLYCSFDSSPQLSDATNRTHNNDANFAIYSNKQFTNYGSSQVGGVNSFKNYSGGLNNINDSFKKYNPGSTSQNERFTNYAENGNVADTGFTSYGVGATSGSGSFNNYDKLVNVPNLRFTSYNPGADNRQLSFSSYGNETNSGTQSFASYGKKGQAGPRDFTNYAVSANILQSDFTGYGESGRRANETFKSYASSGNNPKATFKFYGTGSVFGSQAFTSYRNGANVGDDSFQSYAAKSSSSSASFENYGQSFNVGNDTFKEYGKGAVGRTTIGFKTYGLGRTFKDYAKQGVSFSGYRNFSGSSGRLVNKWVEPGKFFRESTIKEGNVMAMPDIRDKMAARSFLPEALSSKLPFSSASLGEIKEVFHARDGSAMERVILQALEECERAPSRGETKRCVGSGEAMIQFAVSVLGPKVVVRSTENVKGSSTRVMIGKVRTINGGKVTKSVSCHQSLYPYLVYYCHSVPHVRVYEADILDVDSKVRINHGVAICHLDTSAWGPTHGAFVALGSAPGKIEACHWIFENDVTWTTAD 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1027 667 ProSiteProfiles BURP domain profile. 452 666 IPR004873 -
Lele17g1027 667 SMART BURP_2 450 666 IPR004873 -
Lele17g1027 667 Pfam BURP domain 452 664 IPR004873 -
Lele17g1027 667 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 58 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1027 Lele-ChrLele17 20932767 20935282 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1027 17 20932767 20935282 Lele19g0529 19 3076682 3078520 hybridization
Lele17g1027 17 20932767 20935282 Lele20g0925 20 15503625 15508818 hybridization