Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0668 ATGGTTGCAACGAACGTGAAGGGGGAGACGCTGTCTCTGATGGACAAACGGGCTGCGATGGAGGCGGAGATGAACGCAATCATCGAGCGCCTCAATCAACCTGGCTGTCCCGGGCTTTCCGGCAATCTCGTTGATTCTGAGGGCTTTCCTCGGACGGATATTGATATTCCAGTTGTTCGAGCCCAGCGACGTCGTCTTTCTGAGCTGCATAATGATCACCAGGAGATCAGTGAGAAAATAAATCAAAATATTCAAATTTTGCATGCAGCAAGACTTGGAAGTAAAACGTCACCCCTCAAAGTTTCAGGTAATGAAGATAATACTCAGGCCACATCAGCTGTTGATGCTGGCTCATCATTGCAAAATGTTCTTCTAAGACATTTCCCCAATCCCATGGATGTTGATGTTGTTAGTATACCATTTGCGATGGTTGATGAGATATCTGATTCATCACCGGCTGCTGAGGATGGATTACAACTTGGAGATCAAATTTTGAAATTTGGCAGCGTGGAAGCTGGGGATAATTTGCTCCAAAGGCTAGCTTCTGAGTCTCAGTCAAATTTGGGTCACCCAATTCCTGTTGTTATCATGAGGCAAGGTGCTATGATCAACTTAACTGTCACACCTAGAACTTGGCCAGGCAGGGGTCTATTGGGATGTCATTTTCGGTTCTTGTAG 678 0.4587 MVATNVKGETLSLMDKRAAMEAEMNAIIERLNQPGCPGLSGNLVDSEGFPRTDIDIPVVRAQRRRLSELHNDHQEISEKINQNIQILHAARLGSKTSPLKVSGNEDNTQATSAVDAGSSLQNVLLRHFPNPMDVDVVSIPFAMVDEISDSSPAAEDGLQLGDQILKFGSVEAGDNLLQRLASESQSNLGHPIPVVIMRQGAMINLTVTPRTWPGRGLLGCHFRFL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0668 225 CDD PDZ_metalloprotease 142 209 - -
Lele17g0668 225 FunFam 26S proteasome non-ATPase regulatory subunit 9 129 223 - -
Lele17g0668 225 Gene3D - 2 96 - -
Lele17g0668 225 SUPERFAMILY PDZ domain-like 142 222 IPR036034 GO:0005515
Lele17g0668 225 Gene3D - 130 224 IPR036034 GO:0005515
Lele17g0668 225 Pfam Nas2 N_terminal domain 12 89 IPR040815 -
Lele17g0668 225 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9 1 224 IPR035269 GO:0070682
Lele17g0668 225 Coils Coil 59 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0668 Lele-ChrLele17 18583641 18586146 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0668 17 18583641 18586146 Lele19g0883 19 5367122 5369708 hybridization
Lele17g0668 17 18583641 18586146 Lele20g0565 20 13158347 13160721 hybridization