Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0454 ATGATGCTGTCAAAAGTTGAAGCTGGTAAGAAGACTGGCGAAAGCTCGAGAGATGGGAAGCTGTTAAAAGAGATTGAAACTATTAGCAAGGCTTTGTATTTGGATAAAAGATTTCCGAAAAATACAGTATCTTCTTCTAATTCTCTATCCAAGTCTGCCGGGAAATCTCACTTACCTGACCCCAGATCGAAGCCTGCAGCCAGTAATGAAGATCCTTCACGCAAGGATAAGAAGTCCATATGGAATTGGAGACCGTTAAAGGCCTTTTCCCATATCCGCAATCGGAGGTTTGACTGTAGTTTTTCTCTCCAAGTCCATTTGATTGAAAAGTTACCTTCTACTTTTAATAATGCTAGGCTTAGTGTATCCTGGAAGAGGCGGGATGGGGTTTTGGTGACTCGTCCAGCCAAGGTAGTTGAAGGCGTGGCCGAATTTGAAGAGAAATTGACCTACACTTGCTCAGTGTATGGCAGTAGGAGTGGACCTCACTATTCAGCTAAATATCAAGCTAAGCATTTTTTACTCTATGCTTCTATTCTTAGTGCGCCAGAACTCGATTTGGGGAAGCATAGGGTAGACCTCACAAGGCTGCTTCCTCTTGCACTGGAAGAACTTGGAGAGAAGAACTCAGGGAAGTGGACTACAAGTTTTAGATTGTCTGGAGTTGCCGGGGGTGCTGTAATGAACGTCAGTTTTGGGTATGAGGTGGTTGGTGATAACAGTAATGCTACAAAGGACAACCATAATGTTCCTAATGCTTTGACTTCAAGGCGAGTTGGAAGAGCGCCAGGTTTTACCAAGCAGTGTTCTCCTCGAACCATAGATGGTGTAAAGGATCTTCATGAGGTTTTGCCCACATCAAAGTCGGCACTGGCCAGCTCAATAGACATTCTATATCAGAAATTTGATGAAGAAAAGACAAATAAACCAGTGCATGACAAACCTGAAGTGGATTTGTGCTCTGAGAATCTTGAGCACACTAAACCAGATGAATCTCATTTGACTGATTCTGGGAAAGAAGAATCTGAAGTGTGTGTTGGCAATGATGAAAAATGCAGCCCAGTTCCTGGCAATCCTGAAATGGAGCCAGTTCAATCTGACGGTGATGTTAATGTAAACCTTGAAGAGTGCCAAGATAGATTTTCTGTTGTTGATCAAGGCATAGAATCGTCTTCAAATGAACCTCTTAACTTAGAGGCATCCACCACAAAGGAGGCATCCACCACAAAGGCTCCTGATTCTGATGTTGATACCCATGATACTGCTGTTATCCAGTTATCTCCTGAATATGCTATTACATGTGATTCCTTGGGTGAGGAAAATGATGATTCTAAGGAGAAGGTTACGCCAAACAAATTCACTTCTGAAGACGATGACTTTATCACCAAAGAGCTGCTCATGCAAGAATTAGAATTAGCTTTAAATAGTATCTCAGATTTGGAGACAGCTGCACTAGAATCTCCCAAAGATGAGAAATATGTTGAAACCGGATCTGAATATAAAATGAGAAAATCACATAGCTTGGATGATGTTACAGAATCAGTCGCAAGTGAATTTTTAAGCATGATAGGTGCTGACCATAGCCCATTTGGATTGAGTTCTGAAAGCGAAGCTGAGTCCCCAAGAGAGCGCCTTTTAAAGCAATTTGAGAAGGAGGCTCTAGCTGAGGGTTTTTCTTTATTTGATTTTGACATGGGTGATGATGAAGTTGAAGGTGACTATAATGCTCCTCTTGGATCTGAGCAGTTGAACTTCTCTGAGGGCCCCTGGTCTTCATCATTGTTACAAGATCTGCTGCAGGAGGTGCATCCAGTTGGGTCTCAGGAAGTGAGGAGCAAACATAGGGCCCAGATGGTAGAAGACTTGGAAACAGAAGCCTTGATGCGTGAGTGGGGTTTGAATGAGGATGCCTTTAAGCATTCGCCACTGAAGGACCCTGCTGGTTTTGGAAGTCCCATTCACTCGTCACCCGAAGAAGCTCTTACTTTGCCTCCTCTTGTAGAGGGGTTAGGTCCTTTTCTTCAGACAAAGGATGGGGGATTTTTACGAACTTTGGATCCCTCACTTTTCAGGAATGCTAAAAGTGGTGGAAGCTTGATTATGCAAGTATCCAATCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGTGTAATGGAGATCTTGCAGCGTTTGGCTTCATTGGGAATTGAAAAGCTCTCAATGCAGGCAAATAAGTTAATGCCTCTGGAGGATATCACAGGGAAGACAATGCAGCAAGTGGCATGGGAAGCTATGCCTCTTTTGGAGGGAACAGAAAGGCAATGTCTGTCACAGCATGATTTGGTGGCAGGGCAAGATACTAATTTTGTGCAAAGGGACTTGAAAAGAACATCATTGGGACCAAATACGACAAAGTCTAATACAAGTTCATTAGGCAATCAAACAAGTTCAGAATTTGCTTCATTGGAAGATCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATACAGTCTGGGATGTCCGATCAGGATGCACCATCGAACATCATTGCACAATCCATTGGGGATGTTTCAGCTCTCCAGGGCAAGGGGGCTGATATTAGTGGGTCTGTTGGCCTGGATGGAGCTGCAGGTTTGCAGTTGTTGGATCTAAAAGACAGCAGTGATGATGTTGAATCTGGTGATGAGATAATGGATCTATCATTAACTCTGGATGAATGGATGAGGTTGGATTCTGGTGAGATTGATGATATAGAGAATATCAGTGATCATACTTCCAAACTTCTTGCTGCCCATCATGCTAACACTTTTGACTTCATTCGTGGGACCTCTAAGGGAGAGAAGAAAAGAGGCAATGGCCATGGCAGAAAGTGTGGTTTGTTGGGAAATAATTTTACAGTAGCTTTGATGGTGCAACTGCGTGATCCTCTGCGAGACTATGAGCCTGTTGGAACACCAATGCTTGCTCTGATACAAGTGGAGAGGGTGTTTGTCCCACCAAAGTCAAGAATTTTCTGCAATGTGTCCGAGATAATGGGCAATTACAAAGAAGACGATGAGCGTGAAACTAGTGCTAAGTTGGAGTCAAAGGATGACAAGAAAGAGGAAACAAGCTCCGAAGAGGAGGGAATTTCTCAGTTTAAAATAACTGAAGTCCATGTAGCTGGTCTGACAGCCGAACCAGAGCCCCGCAAAAAGAAGCTTTGGGGTACTTCAACCAATGAAAAGTCTGGCTCCCGTTGGTTACTTGCCAATGGAATGGGGAAGAGCAATAAGCATCCAATAATGAAGGCAAAAGTTGCAGCTAAATCTGGTGCTTCAGCCACAACAAAAGTGCAACCTGGTGATACATTATGGAGCATATCATCTCGTGTTTATGGTTCAGGATCAAAATGGAAGGAATTGGCAGCTGTAAATCCACATATCAGAAACCCCAACGTCATTATATCAGATAAAACCATTAGATTGAAGTAA 3474 0.4315 MMLSKVEAGKKTGESSRDGKLLKEIETISKALYLDKRFPKNTVSSSNSLSKSAGKSHLPDPRSKPAASNEDPSRKDKKSIWNWRPLKAFSHIRNRRFDCSFSLQVHLIEKLPSTFNNARLSVSWKRRDGVLVTRPAKVVEGVAEFEEKLTYTCSVYGSRSGPHYSAKYQAKHFLLYASILSAPELDLGKHRVDLTRLLPLALEELGEKNSGKWTTSFRLSGVAGGAVMNVSFGYEVVGDNSNATKDNHNVPNALTSRRVGRAPGFTKQCSPRTIDGVKDLHEVLPTSKSALASSIDILYQKFDEEKTNKPVHDKPEVDLCSENLEHTKPDESHLTDSGKEESEVCVGNDEKCSPVPGNPEMEPVQSDGDVNVNLEECQDRFSVVDQGIESSSNEPLNLEASTTKEASTTKAPDSDVDTHDTAVIQLSPEYAITCDSLGEENDDSKEKVTPNKFTSEDDDFITKELLMQELELALNSISDLETAALESPKDEKYVETGSEYKMRKSHSLDDVTESVASEFLSMIGADHSPFGLSSESEAESPRERLLKQFEKEALAEGFSLFDFDMGDDEVEGDYNAPLGSEQLNFSEGPWSSSLLQDLLQEVHPVGSQEVRSKHRAQMVEDLETEALMREWGLNEDAFKHSPLKDPAGFGSPIHSSPEEALTLPPLVEGLGPFLQTKDGGFLRTLDPSLFRNAKSGGSLIMQVSNPVVVPAEMGSGVMEILQRLASLGIEKLSMQANKLMPLEDITGKTMQQVAWEAMPLLEGTERQCLSQHDLVAGQDTNFVQRDLKRTSLGPNTTKSNTSSLGNQTSSEFASLEDLAPLAMDKIEALSMEGLRIQSGMSDQDAPSNIIAQSIGDVSALQGKGADISGSVGLDGAAGLQLLDLKDSSDDVESGDEIMDLSLTLDEWMRLDSGEIDDIENISDHTSKLLAAHHANTFDFIRGTSKGEKKRGNGHGRKCGLLGNNFTVALMVQLRDPLRDYEPVGTPMLALIQVERVFVPPKSRIFCNVSEIMGNYKEDDERETSAKLESKDDKKEETSSEEEGISQFKITEVHVAGLTAEPEPRKKKLWGTSTNEKSGSRWLLANGMGKSNKHPIMKAKVAAKSGASATTKVQPGDTLWSISSRVYGSGSKWKELAAVNPHIRNPNVIISDKTIRLK 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0454 1157 MobiDBLite consensus disorder prediction 788 809 - -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 40 76 - -
Lele17g0454 1157 Gene3D LysM domain 1099 1157 IPR036779 -
Lele17g0454 1157 SMART LysM_2 1109 1157 IPR018392 -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 387 416 - -
Lele17g0454 1157 ProSiteProfiles C2 NT-type domain profile. 89 236 IPR019448 -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 1017 1045 - -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 326 347 - -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 387 409 - -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 40 54 - -
Lele17g0454 1157 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 94 241 IPR019448 -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 1017 1042 - -
Lele17g0454 1157 Pfam LysM domain 1111 1155 IPR018392 -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 1 20 - -
Lele17g0454 1157 CDD LysM 1111 1148 IPR018392 -
Lele17g0454 1157 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1150 IPR039614 -
Lele17g0454 1157 MobiDBLite consensus disorder prediction 326 348 - -
Lele17g0454 1157 Coils Coil 463 483 - -
Lele17g0454 1157 ProSiteProfiles LysM domain profile. 1108 1156 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0454 Lele-ChrLele17 16832278 16835840 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0454 17 16832278 16835840 Lele19g1089 19 7075003 7076364 hybridization
Lele17g0454 17 16832278 16835840 Lele20g0362 20 11400607 11404702 hybridization