Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1913 ATGGATGAAGAGTACGACGTTATCGTCCTCGGCACTGGCCTCAAGGAATGCATCCTCAGTGGCCTTCTCTCTGTCAATGGCTTAAAGGTGTTGCATATGGACCGAAATGACTATTATGGAGGAGCATCTACGTCTCTCAACCTTACACAGCTATGGAAGCTTCTTAAGGGAGATGACACGCTGCCAGAGCAACTGGGCTCCGGCAGAGAGTACAATGTTGATATGGTACCTAAGTTCATTATGGCAAATGGAGCTCTGGTTCGAGTTTTGATTCACACAGATGTTACTAAGTATTTGCACTTTAAAGCTGTAGATGGCAGTTTTGTTTATAATAAGGGAAAGGTTTATAAAGTTCCAGCAACTGACGTTGAAGCACTGAAATCACCATTAATGGGACTGTTTGAGAAGCGTCGAGCTCGGAAATTCTTCATTTATGTCCAAGACTATGAGGAGAATGACCCAAAATCTCATGAAGGGCTGGATTTGAACCAAGTCACTGCAAGACAGCTGATATCGAAATATGGGTTAGAAGATGATACAATTGATTTCATTGGCCATGCCTTGGCACTCCATATTGATGATAATTACTTGGATCGGCCAGCCATGGACTTTGTGCAGAGAGTAAAGGTGCGTGTTAATGCTCCTACACTTTGGTGTCATTACATGCTGTGGAAAGAATTTATACTTTATGCAGAGTCCCTGGCACGATTTCAAGGAGGATCACCTTATATATACCCACTATATGGATTGGGAGAGTTGCCACAGGCCTTTGCACGTTTGAGTGCAGTGTATGGTGGAACTTACATGCTTAACAAACCAGATTGCAAGGTACAATTTGATGAGAATGGAAAAGCCATTGGTGTGACCTCTGAAGGAGAAACTGCCAAATGCAAGAAAGTTGTGGGCGATCCATCATATCTACCTGATAAGGTCCAAAAAGTTGGGAAGGTTTCGCGTGCAATATGTATTATGAGCCATCCTATTCCAGACACTAATGATTCTCACTCAGCACAGGTCATTCTTCCCCAGAAGCAACTTGGTCGTAAATCAGATATGTATCTCTTCTGCTGCTCTTACACTCACAATGTAGCAGCAAAAGGAAAATATATTGCTTTTGTTACTACAGAAGCAGAGACTGACCAACCTGAGGTAGAGTTGAAGCCTGGTATTGACCTTCTTGGACCTGTCGATGAGATATTTTTTGACACTTATGATAGATTTGTACCCATAAACGATCATGAAGTTGATAACTGTTTCATCTCTATGAGTTATGATCCCACCACACACTTTGAGACAACAGTAAAAGATGTTATTGCAATGTACAGTAAAATCACTGGCAAGGCTCTTGATCTTTCCGTGGACCTGAGTGCTGCAACCGCTGGTGACGCTGAAGAATGA 1398 0.4249 MDEEYDVIVLGTGLKECILSGLLSVNGLKVLHMDRNDYYGGASTSLNLTQLWKLLKGDDTLPEQLGSGREYNVDMVPKFIMANGALVRVLIHTDVTKYLHFKAVDGSFVYNKGKVYKVPATDVEALKSPLMGLFEKRRARKFFIYVQDYEENDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHIDDNYLDRPAMDFVQRVKVRVNAPTLWCHYMLWKEFILYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPDCKVQFDENGKAIGVTSEGETAKCKKVVGDPSYLPDKVQKVGKVSRAICIMSHPIPDTNDSHSAQVILPQKQLGRKSDMYLFCCSYTHNVAAKGKYIAFVTTEAETDQPEVELKPGIDLLGPVDEIFFDTYDRFVPINDHEVDNCFISMSYDPTTHFETTVKDVIAMYSKITGKALDLSVDLSAATAGDAEE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1913 465 SUPERFAMILY FAD/NAD(P)-binding domain 409 452 IPR036188 -
Lele16g1913 465 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 118 242 - -
Lele16g1913 465 FunFam Guanosine nucleotide diphosphate dissociation inhibitor 118 242 - -
Lele16g1913 465 SUPERFAMILY FAD/NAD(P)-binding domain 1 307 IPR036188 -
Lele16g1913 465 Pfam GDP dissociation inhibitor 1 452 IPR018203 GO:0005092|GO:0007264
Lele16g1913 465 Gene3D - 2 449 IPR036188 -
Lele16g1913 465 PRINTS Rab GDI/REP protein family signature 231 248 IPR018203 GO:0005092|GO:0007264
Lele16g1913 465 PRINTS Rab GDI/REP protein family signature 249 270 IPR018203 GO:0005092|GO:0007264
Lele16g1913 465 PRINTS Rab GDI/REP protein family signature 24 41 IPR018203 GO:0005092|GO:0007264
Lele16g1913 465 PRINTS Rab GDI/REP protein family signature 69 86 IPR018203 GO:0005092|GO:0007264
Lele16g1913 465 PRINTS Rab GDI/REP protein family signature 86 102 IPR018203 GO:0005092|GO:0007264
Lele16g1913 465 PRINTS Rab GDI/REP protein family signature 6 24 IPR018203 GO:0005092|GO:0007264
Lele16g1913 465 PRINTS Rab GDI protein signature 400 419 IPR000806 GO:0005093|GO:0015031
Lele16g1913 465 PRINTS Rab GDI protein signature 367 385 IPR000806 GO:0005093|GO:0015031
Lele16g1913 465 PRINTS Rab GDI protein signature 342 358 IPR000806 GO:0005093|GO:0015031
Lele16g1913 465 PRINTS Rab GDI protein signature 421 441 IPR000806 GO:0005093|GO:0015031
Lele16g1913 465 PRINTS Rab GDI protein signature 75 88 IPR000806 GO:0005093|GO:0015031
Lele16g1913 465 PRINTS Rab GDI protein signature 16 28 IPR000806 GO:0005093|GO:0015031
Lele16g1913 465 PRINTS Rab GDI protein signature 125 140 IPR000806 GO:0005093|GO:0015031
Lele16g1913 465 PANTHER RAB GDP-DISSOCIATION INHIBITOR 1 456 IPR018203 GO:0005092|GO:0007264
Lele16g1913 465 SUPERFAMILY FAD-linked reductases, C-terminal domain 311 407 - -
Lele16g1913 465 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 57 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1913 Lele-ChrLele16 11541700 11546966 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0500 14 16638524 16643858 Lele16g1913 16 11541700 11546966 hybridization