Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0500 ATGGATGAAGAGTACGACGTTATCGTCCTCGGCACTGGCCTCAAGGAATGCATCCTCAGTGGCCTTCTCTCTGTCAATGGCTTAAATGTGTTGCATATCGACCGAAATGACTATTATGGAGGAGCATCTACGTCTCTCAACCTTACACAGCTATGGAAGCTTCTTAAGGGAGATGACACGCTGCCAGAGCAACTGGGCTCCGGCAGAGAGTACAATGTTGATATGGTACCTAAGTTCATTATGGCAAATGGAGCTCTGGTTCGAGTTTTGATTCACACAGATGTTACTAAGTATTTGCACTTTAAAGCTGTAGATGGCAGTTTTGTTTATAATAAGGGAAAGGTTTATAAAGTTCCAGCATCTGACGTTGAAGCACTGAAATCACCATTAATGGGACTGTTTGAGAAGCGTCGAGCTCGGAAATTCTTCATTTATGTCCAAGACTATGACGAGAACGACCCAAAATCTCATGAAGGGCTGGATTTGAACCAAGTCACTGCAAGACAGCTGATATCGAAATATGGGTTAGAAGATGATACAATTGATTTCATTGGCCATGCCTTGGCACTCCATATTGATGATAATTACTTGGATCGGCCAGCCATGGACTTTGTGCAGAGAGTAAAGGTGTGTGTTAATGCTTCTACACTTTGGTGGTCCCTGGCACGATTTCAAGGAGGATCACCTTATATATACCCACTATATGGATTGGGAGAGTTGCCACAGGCCTTTGCACGTTTGAGTGCAGTGTATGGTGGAACATACATGCTTAATAAACCAGATTGCAAGGTACAATTTGATGAGAATGGAAAAGCCATTGGTGTGACCTCTGAAGGAGAAACTGCCAAATGCAAGAAAGTTGTGTGCGATCCATCATATCTACCTGATAAGGTCCAAAAAGTTGGGAAGGTTTCGCGTGCAATATGTATTATGAGCCATCCTATTCCAGACACTAACGATTCTCACTCAGCACAGGTCATTCTGCCCCAGAAGCAACTTGGTCGTAAATCAGATATGTATCTCTTCTGTTGCTCTTACACTCACAATGTAGCAGCAAAGGGAAAATATATTGCTTTTGTGACTACAGAGGCAGAAACTGACCAACCTGAGGTAGAGTTGAAGCCTGGTATTGACCTTCTTGGACCTGTCGATGCGATATTTTTCGACACTTATGATAGATTTGTACCCATAAACGATCATGAAGTTGATAACTGTTTCATCTCTATGAGTTATGATCCCACCACACACTTTGAGACAACAGTAAAAGATGTGATTGCAATGTACAGTAAAATCACTGGCAAGGCTCTTGATCTTTCCGTGGACCTGAGTGCTGCAACTGCTGGTGACGCTGAAGAATGA 1359 0.429 MDEEYDVIVLGTGLKECILSGLLSVNGLNVLHIDRNDYYGGASTSLNLTQLWKLLKGDDTLPEQLGSGREYNVDMVPKFIMANGALVRVLIHTDVTKYLHFKAVDGSFVYNKGKVYKVPASDVEALKSPLMGLFEKRRARKFFIYVQDYDENDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHIDDNYLDRPAMDFVQRVKVCVNASTLWWSLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPDCKVQFDENGKAIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVSRAICIMSHPIPDTNDSHSAQVILPQKQLGRKSDMYLFCCSYTHNVAAKGKYIAFVTTEAETDQPEVELKPGIDLLGPVDAIFFDTYDRFVPINDHEVDNCFISMSYDPTTHFETTVKDVIAMYSKITGKALDLSVDLSAATAGDAEE 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0500 452 PANTHER RAB GDP-DISSOCIATION INHIBITOR 1 443 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 Gene3D - 2 436 IPR036188 -
Lele14g0500 452 PRINTS Rab GDI protein signature 408 428 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 PRINTS Rab GDI protein signature 387 406 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 PRINTS Rab GDI protein signature 182 196 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 PRINTS Rab GDI protein signature 75 88 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 PRINTS Rab GDI protein signature 16 28 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 PRINTS Rab GDI protein signature 286 300 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 PRINTS Rab GDI protein signature 125 140 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 PRINTS Rab GDI protein signature 329 345 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 PRINTS Rab GDI protein signature 354 372 IPR000806 GO:0005093|GO:0015031
Lele14g0500 452 SUPERFAMILY FAD/NAD(P)-binding domain 1 294 IPR036188 -
Lele14g0500 452 PRINTS Rab GDI/REP protein family signature 69 86 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 PRINTS Rab GDI/REP protein family signature 24 41 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 PRINTS Rab GDI/REP protein family signature 236 257 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 PRINTS Rab GDI/REP protein family signature 6 24 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 PRINTS Rab GDI/REP protein family signature 86 102 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 PRINTS Rab GDI/REP protein family signature 135 150 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 PRINTS Rab GDI/REP protein family signature 218 235 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 118 229 - -
Lele14g0500 452 Pfam GDP dissociation inhibitor 1 439 IPR018203 GO:0005092|GO:0007264
Lele14g0500 452 SUPERFAMILY FAD-linked reductases, C-terminal domain 298 394 - -
Lele14g0500 452 SUPERFAMILY FAD/NAD(P)-binding domain 396 439 IPR036188 -
Lele14g0500 452 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 57 393 - -
Lele14g0500 452 FunFam Guanosine nucleotide diphosphate dissociation inhibitor 118 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0500 Lele-ChrLele14 16638524 16643858 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0500 14 16638524 16643858 Lele16g1913 16 11541700 11546966 hybridization