Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1892 ATGAACAAGAGAGTATCCAAGGTCATTGATTCTCGTGTTCTATTGAATTTTTGGTTTAGTTCAACGATAACATGGTGTGAAGGAAAAGCTGGTGAATCGGATATTCTGCTCATGCCTGTTAGCAATTTTTTTGTTTTGCAGCTCCACACTCTGGATTCCTGTTTAGAAAGGAAACCTGGTGTTGTCATTCTTGATGAAGATGGGAGACCTGAAGATCGAGTTGAAGCTGCCTTGAATTGTCTTCCACGTTATGATCCTGCTGCAGGATGGGGTATTTCTTCTTTTCCATTTCGGTACTGGAAAATACGTGATTATGCTTATGCATATCGATCAGGAAAAGTTACTCTATCTATGGAAGTCAGGAGGCAGGCATCTGCATCTACTCACAGATTTGAAGCAGGTGCTACTACATGGATGCATGAGGTACGCACTGTTGAAAAGGATGGCGTTTGTGTTTCAAGGCTGCGTAGCTGTGGTGTCATATTTGTAGAGAAGGCAAATATGCATGAAACTACAAGAAATCCTCACGCACCTGATAGGTATATTGGTGGATCTTCTTCAGGTCCAGCTGCAATTGTAGCTTCTAGACTATGTTCTGCTGCACTGGGAACTGATGGGGGAGGTTCAGTCCGCATTCCTTCTTCCCTTTGTGGTGTAGTGGGGTTGAAGACAACATATGTACGGACGTATACGAAAGGGTCATTATGTGATTTTGGGACTGTGGAAATTATTGGACCCATTGCTTCGGCAATGGAGGATGTCATGCTAGTGTGCTCACCACCTTGTTTGCCAAACCTGTCATCCTATGATGATTCAAATACTTTGGGATCATTGCGACTAGGAAAAGTACACTCCGGTAATCCCCCTATACTTTAA 876 0.4315 MNKRVSKVIDSRVLLNFWFSSTITWCEGKAGESDILLMPVSNFFVLQLHTLDSCLERKPGVVILDEDGRPEDRVEAALNCLPRYDPAAGWGISSFPFRYWKIRDYAYAYRSGKVTLSMEVRRQASASTHRFEAGATTWMHEVRTVEKDGVCVSRLRSCGVIFVEKANMHETTRNPHAPDRYIGGSSSGPAAIVASRLCSAALGTDGGGSVRIPSSLCGVVGLKTTYVRTYTKGSLCDFGTVEIIGPIASAMEDVMLVCSPPCLPNLSSYDDSNTLGSLRLGKVHSGNPPIL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1892 291 PANTHER TRANSAMIDASE 134 284 IPR000120 GO:0003824
Lele16g1892 291 Pfam Amidase 139 259 IPR023631 -
Lele16g1892 291 SUPERFAMILY Amidase signature (AS) enzymes 92 261 IPR036928 -
Lele16g1892 291 Gene3D Amidase signature (AS) domain 120 265 IPR036928 -
Lele16g1892 291 ProSitePatterns Amidases signature. 183 214 IPR020556 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1892 Lele-ChrLele16 11329429 11334207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1892 56 282 Acyl Lipid Metabolism Gene Families AT5G64440 49.521 1.55e-81 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1892 16 11329429 11334207 Lele16g1892 16 11329429 11334207 ECH
Lele13g0618 13 18360302 18368188 Lele16g1892 16 11329429 11334207 hybridization
Lele14g0519 14 16885395 16889466 Lele16g1892 16 11329429 11334207 hybridization