Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0519 ATGCTGAGGGAGGCAGGAGGCAGGCATCTGCATCTACTCACAGATTTGAAGCAGGTATTACGATTTGGTTCTGGCACAGATGATGGAAATCCATTATCTATTTTGGATGAAATTTTCTTGGCCATTAAGGATGACATAGTTTGCTACCCTCATCCATCTAAGGGAACTACAAGAAATCCTCACGCACCTGATACGTATATTGGTGGATCTTCTTCAGGTCCAGCCGCAATTGTAGCTTCTGGACTATGTTCTGCTGCACTGGGAGCTGATGGGGGAGATAAGCAGGTTCAGTCCGCATTCCTTCTTCAGTGTAGTGGGGTTAAAGACAACATATGGAGGGACAGGTCATTATGTGATTCTGGGACTGTGGAAATTATTGGACCCACTGCTTCGACAGTGGAGGATGTCATACTAGTGTGCTCACCACCTTGTTTGCCAAACCTGTCATCCTATGATGATTCAAATACTTTGGGATCATTGCGAATAGGAAAAGTACACTCCGGTAATCCCCCTATACTTTAA 522 0.4483 MLREAGGRHLHLLTDLKQVLRFGSGTDDGNPLSILDEIFLAIKDDIVCYPHPSKGTTRNPHAPDTYIGGSSSGPAAIVASGLCSAALGADGGDKQVQSAFLLQCSGVKDNIWRDRSLCDSGTVEIIGPTASTVEDVILVCSPPCLPNLSSYDDSNTLGSLRIGKVHSGNPPIL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0519 173 Pfam Amidase 51 139 IPR023631 -
Lele14g0519 173 Gene3D Amidase signature (AS) domain 26 169 IPR036928 -
Lele14g0519 173 PANTHER TRANSAMIDASE 54 167 IPR000120 GO:0003824
Lele14g0519 173 SUPERFAMILY Amidase signature (AS) enzymes 50 143 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0519 Lele-ChrLele14 16885395 16889466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0519 16 164 Acyl Lipid Metabolism Gene Families AT5G64440 39.631 1.59e-35 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0519 14 16885395 16889466 Lele14g0519 14 16885395 16889466 ECH
Lele14g0519 14 16885395 16889466 Lele15g1865 15 11410671 11419332 hybridization
Lele14g0519 14 16885395 16889466 Lele16g1892 16 11329429 11334207 hybridization