Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1746 ATGACTGGAGGGTCATTGGGTTTGGGTATTCGTTCCGGAAGTTACGGTTCTTTAGATAAACAGCTGCAGAATGGTTTCTCGCCTATTCAAACGGCACGCAAGCCTTCCAAGATGCTCAAAGAGAAAGAGAGATTGTTCCCTTGGATCTGCAAATTTGCTGGGCGAAAGAAGGTCGGAATGCTGTTTCTCTGTAGTATTTCCGCTGCGGTTTTCTTCTGGGTTTTGTACGTTGGAAAAGGTGAAGATACACAGGAGGAAAACAGTGTGCGGAACATTAGTGTAAATGAAAGCCTGTCTGTAACTCTCAGGGGCATAACTGCAAGAGTGGCATCATCCCCACCTCCACCAAGCTACTTTCTAGGGTACACTCTTCCTCCTGGGCATCCATGCAATAGCTTCACCCTCCCTCCTCCACCAGCAGATAAAAAGCGAACTGGACCACGGCCATGCCCGGTTTGTTACCTTCCTGTGGATGAAGCCATTGAAAAGATGCCAAGTTTACCTTCACCTTCCCCAGTTCTTAAGAATTTAACATTTATCCATGAGGAAAATCTAAGTAGAGATGGAGAATTTGGTGGTTCAGACTTTGGTGGATACCCTACTTTGAAGCAAAGAAATTATTCTTTTGATGTACAAGAGTCAATGAGTGTGCACTGTGGGTTTGTTAGAGGAACTAAACCTGGCCGAAGCACAGGATTTGACATAGATGATGATGACCTTTTCCACATGGATCAGTGTCATGGCGTGGTTGTTGCGTCAGCCATATTTGGAAATTTTGATGTGATAAATGAGCCAAAAAATATAAGTGACTACTCCAAGCAGAACGTATGCTTTCTTATGTTTGTTGATGAAGAAACAGCGAGCTATCTGAAGTATTCAGGTAGGCTGGAAAGCAGCAAAAAAATTGGGCTATGGAGAATTATTGTTACCCATAATCTTCCTTACACAGATGCAAGACGGACCGGAAAGGTTCCAAAGCTTCTGTTGCATAGAATGGTTCCAAATGCTCGATATTCTATATGGATTGATGGAAAGCTTGAGCTTGTTGTTGATCCATATCAAATTCTTGAACGGTTTTTGTGGAGGAAAAATGCTACATTTGCAATATCTAAACATTATAGACGCTTTGATGTATTTGTTGAGGCTGAGGCAAATAAAGCTGCTGGGAAGTATGACAATGCCTCTATTGACTTTCAGATTGAGTTTTATAAGAAGGAGGGATTGACCCCGTATACAGAGGCTAAGCTTCCCATTATAAGTGATGTTCCGGAAGGATGTGTTATAGTGAGAGAACATGTTCCTATTAGCAATCTGTTTACTTGTCTTTGGTTCAATGAAGTTGACCGATTTACTTCTAGGGACCAGATTAGTTTCTCTACTGTCAGGGACAAACTTCTGTCGAAGGTGGATTTTCATGTTAACATGTTCTTGGACTGTGAAAGACGCAACTTTGTAGTTCAGAAATATCATATGGACCTCCTGGGACGCCTGGCTCCACCTGTTTCTGTTGCTCTCTCTCCACCGCCACCACCCGATTCACCACCTCTGTTACCTGTGCTTGTAAGTCCTCCTGCTAGGAGAGGCCCTGGAAGACGTGGGAGAGATAGAAGATCAGGTTCTAGGCGCCACCGCAAAGTTGCTGTTGGTAGTAGAGACAATGAGGCAACAAGTTGA 1674 0.4349 MTGGSLGLGIRSGSYGSLDKQLQNGFSPIQTARKPSKMLKEKERLFPWICKFAGRKKVGMLFLCSISAAVFFWVLYVGKGEDTQEENSVRNISVNESLSVTLRGITARVASSPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVDEAIEKMPSLPSPSPVLKNLTFIHEENLSRDGEFGGSDFGGYPTLKQRNYSFDVQESMSVHCGFVRGTKPGRSTGFDIDDDDLFHMDQCHGVVVASAIFGNFDVINEPKNISDYSKQNVCFLMFVDEETASYLKYSGRLESSKKIGLWRIIVTHNLPYTDARRTGKVPKLLLHRMVPNARYSIWIDGKLELVVDPYQILERFLWRKNATFAISKHYRRFDVFVEAEANKAAGKYDNASIDFQIEFYKKEGLTPYTEAKLPIISDVPEGCVIVREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRDKLLSKVDFHVNMFLDCERRNFVVQKYHMDLLGRLAPPVSVALSPPPPPDSPPLLPVLVSPPARRGPGRRGRDRRSGSRRHRKVAVGSRDNEATS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1746 557 PANTHER ALKALINE CERAMIDASE-RELATED 41 491 IPR006852 -
Lele16g1746 557 MobiDBLite consensus disorder prediction 505 522 - -
Lele16g1746 557 MobiDBLite consensus disorder prediction 530 544 - -
Lele16g1746 557 Pfam Protein of unknown function (DUF616) 177 490 IPR006852 -
Lele16g1746 557 MobiDBLite consensus disorder prediction 505 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1746 Lele-ChrLele16 10201697 10207384 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g1746 16 10201697 10207384 Lele16g1746 16 10201697 10207384 ECH
Lele13g0773 13 19587588 19593451 Lele16g1746 16 10201697 10207384 hybridization
Lele14g0662 14 17930687 17937475 Lele16g1746 16 10201697 10207384 hybridization