Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0773 ATGACTGGAGGGTCATTGGGTTTGGGTATTCGTTCCGGAAGCTACGGTTCTTTAGATAAACAGCTGCAGAATGGTTTATCACCTATTCAAACAGCACGCAAGCCTTCCAAGATGCTCAAAGAGAAAGAGAGATTGTTCCCTTGGATCTGCAAATTTGCTGGCCGAAAGAAGGTCGGAATGCTGTTTCTCTGTAGTATTTCCGCTGCGGTTTTCTTCTGGGTTTTGTACGTGGGAAAAGGTGAAGATACACAAGAGGAAAACAGTGTGCGGAACATTAGTGTAAATGAAAGCCTGTCTATAACTCTCAGGGGCATAACTGCAAGAGTGGCATCATCCCCACCTCCACCAAGCTACTTTCTAGGCTACACTCTTCCTCCTGGGCATCCATGCAATAGCTTCACCCTCCCTCCTCCACCTGCAGATAAAAAGCGAACTGGACCACGGCCATGCCCAGTTTGTTACCTTCCTGTGGATGAAGCCATTGAGAAGATGCCAAGTTTACCTTCACCTTCACCAGTTCTTAAGAATTTAACATTTTTATATGAGGAAAATTTAAGTAGAGATGGAGAATTTGGTGGTTCAGACTTTGGTGGATACCCTACTTTGAAGCAGAGAAATGATTCGTTTGATGTACAAGAGTCAATGAGTGTGCACTGTGGGTTTGTTAGAGGAACTAAACCTGGCCGAAGCACAGGATTTGACATAGATGGCGATGACCTTTTACACATGGATCAGTGTCATGGCGTGGTTGTTGCGTCAGCCATATTTGGAAATTTTGATGTGATAAATGAGCCAAAAAATATAAGTGACTACTCCAAGCAGAACGTATGCTTTCTTTTGTTTGTTGATGAAGAAACAGCGAGCCATCTGAAGTATTCAGGTACGCTGGGAAGCAGCAAAAAAATAGGGCTATGGAGAATTATTGTTGCGCATAATCTTCCTTACACAGATGCAAGACGGACTGGAAAGGTTCCAAAGCTTCTGTTGCATAGAATGGTTCCAAATGCTCGATATTCTATATGGATTGATGGAAAGCTTGAGCTTGTTGTTGATCCATATCAAGTTCTTGAAAGGTTTTTGTGGAGGAAAAATGCTACATTTGCAATATCTAAACATTATAGACGCTTTGATGTATTTGTTGAGGCTGAGGCAAATAAAGCTGCTGGAAAGTATGACAATGCCTCTATTGACTTTCAGATTGAGTTTTATAAGAAGGAGGGATTGGCCCCGTATACAGAGGCTAAGCTTCCCATTATAAGTGATGTTCCTGAAGGATGTGTTATAGTGAGAGAACATGTTCCTATTAGCAATCTGTTTACTTGTCTTTGGTTCAATGAAGTTGACCGATTTACTTCTAGGGACCAGATTAGTTTCTCTACCGTCAGGGACAAACTTCTGTCGAAGGTGGATTTTCATGTTAACATGTTCTTGGACTGTGAAAGACGCAACTTTGTAGTTCAGAAATATCATAGGGACCTCCTGGAACGCCTGGCTCCACCTGTTTCTGTTGCTCTGTCTCCACCGCCTCCGCCCAATTCGCCACCTCTGTTACCTGTGCTTGTAAGTCCTCCTGCTAGGAGAGGCCCTGGAAGACGCGGGAGATATAGAAGATCAGGTTCTAGGCGCCACCGCAAAGTTGCTGTTGGTAGTAGAGATAATGATGCAACACGTTGA 1674 0.4343 MTGGSLGLGIRSGSYGSLDKQLQNGLSPIQTARKPSKMLKEKERLFPWICKFAGRKKVGMLFLCSISAAVFFWVLYVGKGEDTQEENSVRNISVNESLSITLRGITARVASSPPPPSYFLGYTLPPGHPCNSFTLPPPPADKKRTGPRPCPVCYLPVDEAIEKMPSLPSPSPVLKNLTFLYEENLSRDGEFGGSDFGGYPTLKQRNDSFDVQESMSVHCGFVRGTKPGRSTGFDIDGDDLLHMDQCHGVVVASAIFGNFDVINEPKNISDYSKQNVCFLLFVDEETASHLKYSGTLGSSKKIGLWRIIVAHNLPYTDARRTGKVPKLLLHRMVPNARYSIWIDGKLELVVDPYQVLERFLWRKNATFAISKHYRRFDVFVEAEANKAAGKYDNASIDFQIEFYKKEGLAPYTEAKLPIISDVPEGCVIVREHVPISNLFTCLWFNEVDRFTSRDQISFSTVRDKLLSKVDFHVNMFLDCERRNFVVQKYHRDLLERLAPPVSVALSPPPPPNSPPLLPVLVSPPARRGPGRRGRYRRSGSRRHRKVAVGSRDNDATR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0773 557 MobiDBLite consensus disorder prediction 505 522 - -
Lele13g0773 557 PANTHER ALKALINE CERAMIDASE-RELATED 41 492 IPR006852 -
Lele13g0773 557 MobiDBLite consensus disorder prediction 505 557 - -
Lele13g0773 557 MobiDBLite consensus disorder prediction 529 544 - -
Lele13g0773 557 Pfam Protein of unknown function (DUF616) 177 490 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0773 Lele-ChrLele13 19587588 19593451 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0773 13 19587588 19593451 Lele13g0773 13 19587588 19593451 ECH
Lele13g0773 13 19587588 19593451 Lele15g1711 15 10215721 10221734 hybridization
Lele13g0773 13 19587588 19593451 Lele16g1746 16 10201697 10207384 hybridization