Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1697 ATGTCTCCCTTTCTTATAGATTTATGGATTAAGGCTATGGGGAAAAGAAAGTCAAGAGCAAAGCCACCTCCCAAGAAACGATTGGATAAGCTTGATACTGTCTTCAGCTGCCCTTTCTGTAATCATGGTACTGGTGTTGAATGCCGCATTGATATGAAGAACTTGATAGGAGAAGCTTCTTGCAGAATATGCCAAGAGAGCTTTAGCACTACCATCACAGCTTTATCTGAGCCAATAGACATATACAGCGAATGGATTGATGAATGTGAAAGGGTGAACAACCTGGAAGATGACGGGGCGTAG 303 0.4257 MSPFLIDLWIKAMGKRKSRAKPPPKKRLDKLDTVFSCPFCNHGTGVECRIDMKNLIGEASCRICQESFSTTITALSEPIDIYSEWIDECERVNNLEDDGA 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1697 100 Pfam Transcription elongation factor Elf1 like 14 90 IPR007808 -
Lele16g1697 100 PANTHER UNCHARACTERIZED 13 97 IPR007808 -
Lele16g1697 100 SUPERFAMILY Zinc beta-ribbon 13 93 - -
Lele16g1697 100 FunFam Transcription elongation factor 1 homolog 27 94 - -
Lele16g1697 100 Gene3D - 28 94 IPR038567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1697 Lele-ChrLele16 9832818 9834707 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1659 15 9872696 9873445 Lele16g1697 16 9832818 9834707 ECH
Lele16g1697 16 9832818 9834707 Lele16g1697 16 9832818 9834707 ECH
Lele13g0819 13 19915554 19916345 Lele16g1697 16 9832818 9834707 hybridization