Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0819 ATGGGAAAAAGAAAGTCAAGAGCAAAGCCACCTCCCAAGAAACGAATGGATAAGCTTGATACTGTCTTCAGCTGCCCTTTCTGTAATCATGGCACCAGTGTTGAATGCCGCATTGATATGAAGAACTTGATAGGGGAAGCATCTTGCAGGATATGCCAAGAGAGCTTTAGCACCACGATCACAGCTTTATCTGAGGCAATAGACATAAATTTTGCTGCATCTAAAGCAGATACAGAGAATGGATTGAATCTGTCCAAGTTTATGCTTTCATCTACCAGTAATTATGCCATTTCCTGTTTATGTACTGGTGCTGGTATAAGCTTAGATTTTAAGTAG 336 0.4048 MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEASCRICQESFSTTITALSEAIDINFAASKADTENGLNLSKFMLSSTSNYAISCLCTGAGISLDFK 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0819 111 Gene3D - 16 72 IPR038567 -
Lele13g0819 111 PANTHER UNCHARACTERIZED 1 69 IPR007808 -
Lele13g0819 111 FunFam Transcription elongation factor 1 homolog 15 72 - -
Lele13g0819 111 Pfam Transcription elongation factor Elf1 like 2 69 IPR007808 -
Lele13g0819 111 SUPERFAMILY Zinc beta-ribbon 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0819 Lele-ChrLele13 19915554 19916345 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0819 13 19915554 19916345 Lele13g0819 13 19915554 19916345 ECH
Lele13g0819 13 19915554 19916345 Lele15g1659 15 9872696 9873445 hybridization
Lele13g0819 13 19915554 19916345 Lele16g1697 16 9832818 9834707 hybridization