Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0236 ATGGGGGAACTGATTCCAATTTACTTCATTATCGTTGCTTTCTTATGCACAAGTGGGGCTATTGTTTTGGCTGCTCTGCACATTTACAGGCACCTCTTGAATTATACTGAGCCTACTTATCAACGGTTTATTGTTCGTATTATCTTTATGGTTCCGGTCTATGCATTGATGTCTTTCTTGTCCCTCGTTCTACCTGAGAGTTCAATCTATTTTAATTCCATTCGGGAAGTATATGAAGCTTGGGTCATCTATAATTTCTTTTCATTGTGTCTAGCATGGGTTGGTGGTCCTGGAGCAGTGGTTGTAAGTTTGAGTGGTCGGGTTCTGAAGCCATCATGGTATCTGATGACTTGCTGCTTTCCACCTATTCCCCTTGATGGGCGTTTCATACGGAAATGCAAGCAAGGTTGCCTGCAGTTTGTGATCTTGAAGCCTATTTTAGTTGTTGTCACAATGGTGCTTTATGCAAAGGGGAAATATAAAGACGGAAATTTTAGTCCAATGCAGTCATACTTGTATCTTACAATCATATATACAATATCATACACAATGGCCCTCTATGCTCTTGCATTGTTTTATGTGGCATGCAAGGATCTTCTTCAGCCATTCAATCCAGTCCCGAAGTTTATCATTATAAAATCTGTTGTATTCCTGACTTATTGGCAGGGTGTTTTAGTTTTCCTTGCTGCAAAGTTGAGAGTTATTGAGGGTGCGGAAGAAGCTGCTCTACTTCAAAATTTTATCATTTGTGTTGAGATGCTTGTCGCTGCTGTGGGTCATTTCTATGCGTTTCCATACAAAGAGTATGCTGGTGCTAACATAGGTGTAACCCGTGGTTTCACAGCTAGCCTGGGGCATGCCTTAAAGTTGAATGATTTTTACCATGACACAGTCCACCAGTTTGCACCAACATATCATGAATATGTTCTCTACAGTAACAGTGAAGGCGAAGAAGGAACAAGGAAGTATCGGTCACGGACTTTTGTTCCAACAGGACCAGAGATGGATAGTGCTAGAAAAAATAAACTAATGTTTGGAAATAATCTAGATGACATACAGCTCTCGTGTGTTCCTCCCATGGACTCTGGCTCTGCGTCTGATGCCCCTCATTCTGCTGCAACGGGGTCTTCCTTGCTCGTGGATATATCAAATTCTGTGCCTGTGCCTGTGTCATACGAGATCGCCCTTGTTGAGCTGGATCCATCTAGTTACCCTGAAAAAGTTCCTGCAGCTGATAAAGATGGTAATAGGTGA 1254 0.4203 MGELIPIYFIIVAFLCTSGAIVLAALHIYRHLLNYTEPTYQRFIVRIIFMVPVYALMSFLSLVLPESSIYFNSIREVYEAWVIYNFFSLCLAWVGGPGAVVVSLSGRVLKPSWYLMTCCFPPIPLDGRFIRKCKQGCLQFVILKPILVVVTMVLYAKGKYKDGNFSPMQSYLYLTIIYTISYTMALYALALFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVLVFLAAKLRVIEGAEEAALLQNFIICVEMLVAAVGHFYAFPYKEYAGANIGVTRGFTASLGHALKLNDFYHDTVHQFAPTYHEYVLYSNSEGEEGTRKYRSRTFVPTGPEMDSARKNKLMFGNNLDDIQLSCVPPMDSGSASDAPHSAATGSSLLVDISNSVPVPVSYEIALVELDPSSYPEKVPAADKDGNR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0236 417 Pfam Organic solute transporter Ostalpha 10 269 IPR005178 -
Lele16g0236 417 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 9 326 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0236 Lele-ChrLele16 1316637 1320245 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0270 05 1511778 1515696 Lele16g0236 16 1316637 1320245 CCT
Lele13g2183 13 28376857 28378486 Lele16g0236 16 1316637 1320245 hybridization