Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0270 ATGGGGGAACCGGTTCCAATTTACTACAGCATCGTCGCCTTTTTTTGCACGGGCGGAGCTATTGCTCTGGCCGTTCTGCACATTTACAAGCACCTCCTCAATTACACGGAACCTACTTATCAGAGATTAATTGTTCGTATAATTTTTATGGTCCCGGTTTATGCATTAATGTCTTTCTTGTGCCTTGTTCTACCTGATAGTTCAATCTATTTTAATTCTGTTCGGGAAGTCTATGAGGCTTGGGTGATTTATAATTTCTTGACTTTGTGTCTGGAATGGGTTGGTGGTCCTGGAGCAGTGGTCCTAAGTTTGAGTGGCCGGATTCTGAAGCCATCATGGTATCTTATGACTTGTTGCTTACCTCCTATACCACTGGATGGCCGTTTTATACGCAAATGCAAGCAAGGATGTTTGCAGTTTGTGATTTTGAAGCCACTCTTAGTTGCCATTACACTTATACTTTATGCAAAGGGGAAATACAAAGATGGAAATTTCAGCCCAAATCAATCATACCTGTACCTCACAATTATATATACAATCTCATACACAATGGCTCTCTACGCTCTTGTTCTGTTTTATGTGGCCTGCAAGGATCTGCTTCAGCCATTCAATCCAGTTCCTAAGTTTATCATAATAAAATCTGTTGTATTTCTGACTTATTGGCAGGGTGTTATGTTTTTTCTTGCTGCCAAGTCGAAATTCATTGAGAATGCAGATGAAGCTGCCCAACTACAAAATTTTATCATCTGTGTTGAAATGCTAGTTGCTGCTGTGGGGCATTTTTATGCATTTCCTTACAAAGAATATGCCGGTGCTAATATAGGTGAATCCCGTGGACTAACAGCTAGCATTGCTCATGCTCTAATGATAAATGACTTTTACCATGACACAGTACATCAGTTTGCGCCTACGTATCATGATTATGTTCTCTACAACCATGGTGAAGGTGAAGAGGGAACTAGGAAGTATAGGTCACGGACTTTTGTGCCAATTGGCCCAGAGATGGACACTGTGAGAAGAAATAAGCATATGTTTGGAAGCAAGATAGATGACGTACAGCTCTCAAATATCTCTTCCAATACTAGCTCGGCGTCCTCATATTCTGGACGTGTGTCTGATACAATGAAATCTTCCTTGCTTGTGGATATTTCAAATTCTACATCTACACCGTATGACATGACACTTATTGATTTGGATGAATCCAGTTACCCTGCAAAGGTTGCTGCAGCCGATAAAGCTGGTCCTAGCCCCCTGATTCCTGTTGAATTTCAAATGAGACAGTTCTTTGAGTCTGATTTGGTTCGGCTGAACGCGGGGGAGAATATATGGTTCGGTTTGTTGCATTGTCTTTTGCCATGGGGGAACATGGAAAAGTGA 1377 0.4139 MGEPVPIYYSIVAFFCTGGAIALAVLHIYKHLLNYTEPTYQRLIVRIIFMVPVYALMSFLCLVLPDSSIYFNSVREVYEAWVIYNFLTLCLEWVGGPGAVVLSLSGRILKPSWYLMTCCLPPIPLDGRFIRKCKQGCLQFVILKPLLVAITLILYAKGKYKDGNFSPNQSYLYLTIIYTISYTMALYALVLFYVACKDLLQPFNPVPKFIIIKSVVFLTYWQGVMFFLAAKSKFIENADEAAQLQNFIICVEMLVAAVGHFYAFPYKEYAGANIGESRGLTASIAHALMINDFYHDTVHQFAPTYHDYVLYNHGEGEEGTRKYRSRTFVPIGPEMDTVRRNKHMFGSKIDDVQLSNISSNTSSASSYSGRVSDTMKSSLLVDISNSTSTPYDMTLIDLDESSYPAKVAAADKAGPSPLIPVEFQMRQFFESDLVRLNAGENIWFGLLHCLLPWGNMEK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0270 458 Pfam Organic solute transporter Ostalpha 10 269 IPR005178 -
Lele05g0270 458 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 9 376 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0270 Lele-ChrLele05 1511778 1515696 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0270 05 1511778 1515696 Lele13g2183 13 28376857 28378486 CCT
Lele05g0270 05 1511778 1515696 Lele15g0231 15 1298393 1305429 CCT
Lele05g0270 05 1511778 1515696 Lele16g0236 16 1316637 1320245 CCT
Lele05g0270 05 1511778 1515696 Lele07g0286 07 1563138 1568985 hybridization
Lele05g0270 05 1511778 1515696 Lele08g0090 08 523079 527481 hybridization