Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0502 ATGAAAATAATGAATTTGGAGATATTCCCGGTTTTCATTTGAACTTTTATAGGTGGCGTTGTGGGTAATGTCGTCGCCAGTTCGGAAAGTTCAATTCTGGTTCCAGGATTACTAAAGGATAATGAAAAAGAGCCAGAAATGCAAATTGGTGTTCCCACAGATGTAAAGCATGTGGCGCATATAGGATGGGATGGTCCCTCTGTAAATACTCCTAGTAGGATGAACGAGTTCAAATCTCAATCCGCGTATTCATCTTCACCTTTAAGTCTCAGTGGGAGCATCAAGATGACAGAGCCTGATAATGCCGCCAAATGCGTTTCAGGAGCGAGCTCTAAAGAGAGGGACCTGCCCGACCTGCCCAAGTCATCAAGACGACAGTTAACGGGCAATGCCGCCGATTCTCCGACCAGGGAAAAGTCAGACAAACCAAGGCAGGGCCGGAAATCATCCAGACCCGCCCGGGACCAAGGAAGTGAGTCTCCCGGAGGGGACATACCCAACATTCCCAAGAAGTCTCACCGCAGGAAGTCGAAGGAAATTTCTTGTGGTGTCCCTTCCAAATCCAGATTGAAAGCCTCACATTTGGATCCGAACTTTGGTTTCGGGTCACCAAGCGGACCCGTCCCCAAGTATAACAAGGAAGTAGATGGACGGGGCGGAAATGGATCGAGTGAGGAGTTCTTATGA 687 0.4833 MKIMNLEIFPVFIXTFIGGVVGNVVASSESSILVPGLLKDNEKEPEMQIGVPTDVKHVAHIGWDGPSVNTPSRMNEFKSQSAYSSSPLSLSGSIKMTEPDNAAKCVSGASSKERDLPDLPKSSRRQLTGNAADSPTREKSDKPRQGRKSSRPARDQGSESPGGDIPNIPKKSHRRKSKEISCGVPSKSRLKASHLDPNFGFGSPSGPVPKYNKEVDGRGGNGSSEEFL 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0502 228 Pfam P21-Rho-binding domain 48 106 IPR000095 -
Lele15g0502 228 MobiDBLite consensus disorder prediction 135 154 - -
Lele15g0502 228 ProSiteProfiles CRIB domain profile. 49 62 IPR000095 -
Lele15g0502 228 CDD CRIB 47 65 - -
Lele15g0502 228 SMART PBD_5 49 87 IPR000095 -
Lele15g0502 228 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 41 190 IPR044510 -
Lele15g0502 228 MobiDBLite consensus disorder prediction 68 96 - -
Lele15g0502 228 MobiDBLite consensus disorder prediction 62 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0502 Lele-ChrLele15 2950089 2952745 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1218 06 7664565 7667231 Lele15g0502 15 2950089 2952745 CCT
Lele08g1217 08 7660372 7663050 Lele15g0502 15 2950089 2952745 CCT
Lele15g0502 15 2950089 2952745 Lele15g0502 15 2950089 2952745 ECH
Lele13g1906 13 26769375 26771557 Lele15g0502 15 2950089 2952745 hybridization