Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1217 ATGAACATCTTCACCAAGAAACCCACGGCCAAAGAGGCTCTTAGGGAGAGTAAGCGAGAAATGGCACACGCTACTAGAGGCATTGAGAAGGAAATTGGAGCATTACAATTGGAAGAAAAAAAGCTTCTTGCTGAAATAAAGAGAACTGCCAAGACTGGAAACGAGGCAGCAACTAAAGTTTTGGCTCGCCAATTGGTTAGGCTTAGGCAACAAATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACACAGGCGATGCATGCCCAGTCTTCTGTTGCTGTTGGTATGAAAGGTGCTAGTAAGGCAATGGCAGCTATGAATAAGCAAATGAATCCTGCAAAGCAAGCAAATGTTATACGGGACTTCCAGAAACAATCGGCGCAGATGGATATGACAACTGAAATGATGTCAGATGCCATAGATGATGCATTGGATAATGATGAAGCTGAAGAGGAGACTGAAGACCTGACAAATCAGGTGCTTGATGAAATTGGCGTGGATGTGGCCTCGCAGTTGTCAGCGGCTCCTAAAGGAAGAATTGCAACAAAAAGTACTGCAAATGCCAGCAGCTCGGGCGTTGATGACCTAGATAAACGTTTGGCATCTCTAAGAAACCCATAA 639 0.4476 MNIFTKKPTAKEALRESKREMAHATRGIEKEIGALQLEEKKLLAEIKRTAKTGNEAATKVLARQLVRLRQQIANLQGSRAQMRGIATHTQAMHAQSSVAVGMKGASKAMAAMNKQMNPAKQANVIRDFQKQSAQMDMTTEMMSDAIDDALDNDEAEEETEDLTNQVLDEIGVDVASQLSAAPKGRIATKSTANASSSGVDDLDKRLASLRNP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1217 212 MobiDBLite consensus disorder prediction 183 198 - -
Lele08g1217 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Lele08g1217 212 MobiDBLite consensus disorder prediction 1 22 - -
Lele08g1217 212 MobiDBLite consensus disorder prediction 182 212 - -
Lele08g1217 212 Gene3D - 4 181 - -
Lele08g1217 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 211 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1217 Lele-ChrLele08 7660372 7663050 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1217 08 7660372 7663050 Lele13g1906 13 26769375 26771557 CCT
Lele08g1217 08 7660372 7663050 Lele15g0502 15 2950089 2952745 CCT
Lele08g1217 08 7660372 7663050 Lele08g1217 08 7660372 7663050 ECH
Lele05g1360 05 8523636 8530437 Lele08g1217 08 7660372 7663050 hybridization
Lele06g1218 06 7664565 7667231 Lele08g1217 08 7660372 7663050 hybridization