Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0251 ATGATTAACTCTCGTTACTCAATGGCCGGGAATTATTGGGGTATGGATGATTGTGGTAAGGTTTTGAGGGGATGGAGCTGGGAGGAGAACAAATTGTTCGAGGTGGCGCTTGCGGTGGTAGATGAGCAATACCCAGATCGGTGGGAGGTGATTGCAGCCATGGTCGGAGGCAATAAGAATGCCGGCGACGTTCAAGAGCACTATGTGACCCTTTTGGAGGATTTGCGTCTCATAGAATCAGGCAAGTTCGACCATAAGCTTCCACACACTCAACCCAGTCTTCTTCTCGATCTTACCCACTCGTTATGCCTGTCCGACTAG 321 0.4984 MINSRYSMAGNYWGMDDCGKVLRGWSWEENKLFEVALAVVDEQYPDRWEVIAAMVGGNKNAGDVQEHYVTLLEDLRLIESGKFDHKLPHTQPSLLLDLTHSLCLSD 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0251 106 Gene3D - 22 85 - -
Lele15g0251 106 SUPERFAMILY Homeodomain-like 24 80 IPR009057 -
Lele15g0251 106 FunFam Transcription factor SRM1 20 85 - -
Lele15g0251 106 CDD SANT 25 72 IPR001005 -
Lele15g0251 106 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Lele15g0251 106 SMART sant 21 74 IPR001005 -
Lele15g0251 106 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 23 84 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0251 Lele-ChrLele15 1428246 1428791 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0251 15 1428246 1428791 Lele05g0312 05 1769023 1770765 CCT
Lele13g2159 13 28258295 28260041 Lele15g0251 15 1428246 1428791 hybridization
Lele14g2095 14 26600921 26601199 Lele15g0251 15 1428246 1428791 hybridization