Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2159 ATGTTAGAAAAAGACTTGATTGCCCCTGAGACCTGCGTCCTCTTCTCTGTCTCTTCTCTGTTAACAACCTCCCCAGCAAGTGCTCTGTCCGGGAGTTTTTGGGGCATGGATGATTGTGGTAAGGTTTTGAGGGGATGGAGCTGGGAGGAGAACAAATTGTTCGAGGCGGCGCTTGCGGTGGTAGATGAGCAATACCCAGATCGGTGGGAGGTGATTGCAGCCATGGTCGGAGGCAATAAGAATGCCGGCGACGTTCAAGAGCACTATGGGACCCTTTTGGAGGATTTGCGTCTCATAGAATCAGGGAAGCTCGACCATAAGCTTCCACACACTCAACCCAGTCTTCTTCTCGACCTTACCCACTCGTTATGCCTGTCCGACTAA 384 0.5156 MLEKDLIAPETCVLFSVSSLLTTSPASALSGSFWGMDDCGKVLRGWSWEENKLFEAALAVVDEQYPDRWEVIAAMVGGNKNAGDVQEHYGTLLEDLRLIESGKLDHKLPHTQPSLLLDLTHSLCLSD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2159 127 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Lele13g2159 127 CDD SANT 46 93 IPR001005 -
Lele13g2159 127 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 44 105 IPR044636 GO:0003700
Lele13g2159 127 SMART sant 42 95 IPR001005 -
Lele13g2159 127 FunFam Transcription factor SRM1 41 106 - -
Lele13g2159 127 Gene3D - 43 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2159 Lele-ChrLele13 28258295 28260041 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2159 13 28258295 28260041 Lele05g0312 05 1769023 1770765 CCT
Lele13g2159 13 28258295 28260041 Lele15g0251 15 1428246 1428791 hybridization