Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0172 ATGGATGCTGATTCTTCTTGGGCTGCTCGTCTTTCATCTGCATCTAAGCGTTACCAGTCCGCTCTTCAATCCCGATCAGATGTGTTCATGGGTTTTGACGAAAATGATGGAGACGATGATATAAGGGAGGAATTTCTGTGCCCTTTTTGTTCCGAGTATTTTGATATTGTTGGATTATGCTGCCACATTGATGAAGAGCATCCCATGGAGGCAAAAAATGGGGTATGTCCAGTTTGTGCGTTGAGGCATTCTGTAAGGTTTTATTACATTGTGAGACATGTAGCAGAAGGTTCAAGTTATTTGAGTATATTTATATTTCTGTGCTGTTTAACTGAAGATGATATTCTTTTGTTAGGGTTACAGGAAGATATTATGAATGAACTTCAAAAGAATCTTTTTAGTTGA 405 0.3827 MDADSSWAARLSSASKRYQSALQSRSDVFMGFDENDGDDDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRHSVRFYYIVRHVAEGSSYLSIFIFLCCLTEDDILLLGLQEDIMNELQKNLFS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0172 134 Pfam Drought induced 19 protein (Di19), zinc-binding 43 84 IPR008598 -
Lele15g0172 134 PANTHER PROTEIN DEHYDRATION-INDUCED 19 30 84 IPR033347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0172 Lele-ChrLele15 1043698 1045750 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g0172 15 1043698 1045750 Lele15g0172 15 1043698 1045750 ECH
Lele15g0172 15 1043698 1045750 Lele05g0367 05 2097593 2098148 ECH
Lele15g0172 15 1043698 1045750 Lele06g0184 06 1125481 1127279 ECH
Lele15g0172 15 1043698 1045750 Lele07g0385 07 2173100 2174704 ECH
Lele15g0172 15 1043698 1045750 Lele08g0191 08 1162440 1164025 ECH
Lele13g2240 13 28627550 28630715 Lele15g0172 15 1043698 1045750 hybridization
Lele14g2174 14 26995558 26999051 Lele15g0172 15 1043698 1045750 hybridization