Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2174 ATGGATGCCGATTCTTCTTGGGCTGCTCGTCTTTCATCTGCCTCAAAGCGTTACCAGTCTGCTCTCCAATCCCGATCAGATGTGTTCATGGGTTTTGACGAAAACGATGGAGATGATGATATAAGGGAGGAATTTCTGTGCCCGTTTTGTTCTGAGTATTTTGATATTGTTGGATTATGCTGCCACATTGATGAAGAGCATCCCATGGAGGCGAAAAATGGGGTATGTCCAGTTTGTGCATTGAGGGTGGGATTTGATATGGTTGCACACATAACGCTACAACATGGAAGCATATTCAAGATATCCTTTTCTTTTAAGTTTTATGCACCAACTGTTCAGTTTTCTTTAGCATTTTTTGTTGCAAGTTCATTTTTTGACCATTCTGTAAGGTTTTATTACATTGTGAGACATGTTGCAGAAGATGAAACTGTTTCAAGACGAAATGTTGAGACATCTCCCCTGTCAGTGAAGGATAAGGAAGAGAGGGCAAAAAGATGTGAGTTTGTTCAAGGGCTGTTGCTGTCCACCATATTTGATGACAATTTATGA 549 0.4044 MDADSSWAARLSSASKRYQSALQSRSDVFMGFDENDGDDDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGFDMVAHITLQHGSIFKISFSFKFYAPTVQFSLAFFVASSFFDHSVRFYYIVRHVAEDETVSRRNVETSPLSVKDKEERAKRCEFVQGLLLSTIFDDNL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2174 182 PANTHER PROTEIN DEHYDRATION-INDUCED 19 140 179 IPR033347 -
Lele14g2174 182 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
Lele14g2174 182 Pfam Stress-induced protein Di19, C-terminal 139 177 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2174 Lele-ChrLele14 26995558 26999051 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2174 14 26995558 26999051 Lele14g2174 14 26995558 26999051 ECH
Lele14g2174 14 26995558 26999051 Lele05g0367 05 2097593 2098148 ECH
Lele14g2174 14 26995558 26999051 Lele06g0184 06 1125481 1127279 ECH
Lele14g2174 14 26995558 26999051 Lele07g0385 07 2173100 2174704 ECH
Lele14g2174 14 26995558 26999051 Lele08g0191 08 1162440 1164025 ECH
Lele14g2174 14 26995558 26999051 Lele15g0172 15 1043698 1045750 hybridization