Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1903 ATGAGGACTTTCTTCGCTCCTGACTCCTGTAAAGAAGTACAAGCAAATGTTCTGAATCCACAGTCCTGGCTCCAGGTTGAAAGAGGGAAACTTCCCAAACTGTCATCACAATCCTCTTCTGCATCAATTGAGTCTCTAATCAAGGTCCCAGATCCATCGATACAACCATTCTTTAAACCTGTTGATTATGTGGAAGTTCTAGCTGAAATTCATGAAGAACTCGAGTCATGTGCCCCACAAGAGCGGTCAAACCTATATTTATTGCAATACCACGTCTTTAGGGGGCTTGGGGAAGTTAAATTGATGCGTAGAAGCCTCCGGGCAGCTTGGCAGAGAGCTAACACTGTTCATGAGAAGATAATATTTGGGGCTTGGTTAAAGTATGAGAAACAAGGGGAAGAGCTGATTGCTGATTTGCTGAAAACTTGTGGTAAATGTGCAAAGGAGTTTGTGCTAATAGATGTGGCATCTCATATTCCTTTTGATGTTGATGAAAGTTTGCAAGAGAGACTTTCGGTGAATGGGAACCACATTTCACAATATGTTATTTTTACCATTGGAAATGATAAGATAATTTGTGACAGACATAAAATGTCCGAACTTTCAGCACCATTTCATGCAATGCTAAAGGGATCTTTCAGTGAGTCACTTTCTGAGACCATAGATTTGTCTGAGAACAATATCTCCCCTGCAGGCTTGAGGGCAATAAGTTACTTCAGTCTGAGAGGCAGTTTATATGACGTTCCCCCAAATCTATTGTTGGAGATATTAGCTTTTGCTAACAAGTATTGTTGTGAAAGACTCAAAGATGCTTGTGATAGAAGACTAGCGTCTTTAATTTCCTCCAAAGAAGATGCTGTGGAACTCATGGATTATGCTCTTGATGAGAATTCTCATGTCCTTGCCGCATCTTGTTTGCAAGTCCTTTTATGCGATCTTCCAAACTGTTTGAATGACAATAGGGTGGTAGGGATATTTACTGGTGCTAATAGGCAGCAGCTGGCAGTCATGGTTGGGCCTGGTTTATTTTCACTTTACTGTTTACTAAGTGAAGTTTCTATGAACCTTGATCCTAGTTCAGATATAGCAGTTAAGTTCCTGGAAAGATTGGTGGATTTTGCTGAAACAGACAAGCAGAGACTGCTGGCTTTTCATCAGTTGGGATGTGTAAGACTCTTAAGGAAAGAACATGATGAAGCCTGTAGCCTATTTGAGGGTGCTTTAAATGCAGGCCATATTTATTCTGTAGCAGGTTTAGCTAGATTGGATTTTATAAAGGGTGAGAAGCTTCTATCTTATGAGAAGCTCAGCTCAGTAATTTCCTCTGTAACCCCAGTAGGGTGGATGTACCAGGAAAGATCACTATATTGTGAAGGCAACAATAGGTGGGAGGACCTTGAGAAAGCAACCGATCTAGACCCTACGCTTATATATCCCTACATGTGTAGGGCTGCCAATTTAATGAGGACTCAAAATGTTCAAGCCGCCCTGGCAGAAATCAATAGGATACTTGGTTTCAAACTTCCATTGGAATGCTTAGAACTACGGTTTTTTCTCAATCTAGCCCTTGAGGACTACAAAGCAGCCCTTTGTGATGTTCAAGCAATTCTTACTCTGCGTCCTGATTATAGAATGTTTGAGGGGCGAGTAGCGGCATCCCAGTTCTGTACTCTTGTACGTGAGCATGTTGAACAGTGGACTACGGCAGATTGTTGGGCTCGATTGTATGATTGTTGGTCTGCAGTTGATGATATTGGGTCTCTCTCTGTTATCTATCAGATGCTTGAATCTGATGCAGCAAAGGGTGTCCTATACTTCAGACAGTCCTTGCTTCTTCTTAGGCTAAACTGTCCTGAGGCTGCTATGCGGAGTTTACAATTAGCTCGCCAACATGCATCAAGTAAGCACGAAGAACTTGTATATGAGGGGTGGATCTTGTATGATACGGGTCACTATGAGGAAGGGCTCCAGAAAGCTGAAGAATCTATTAGTAGCAAAAGGTCCTTTGAGGCTTTCTTCCTCAAGGCCTATGCATTGGCTGACTCTAGTCTAGATTCATCATGTTCTTCAACTGTTATTTCCCTTCTGGAAGATGCATTGAGGTGTCCATCGGATAATCTTCGCAAAGGTCAGGCCCTGAACAATCTTGGTAGTGTTTTCGTTGACTCTGGGAAATTAGACTCGGCAGCTGATTGTTACATAAATGCTCTTGAAATCCGGCATACCCGAGCACACCAGGGTCTTGCTCGTGTTTATTTTTTCAAGAATGATAAGGCTGCTGCTTATAATGAAATGACCAAACTTATTGAGAAGGCAAAAAACAATGCATCTGCCTATGAGAAGAGATCCGAGTACTGTGATCGGGAACTTGCAAAGGCTGACCTGGAGATGGTGACTCGATTAGATCCACTGAGAGTATATCCTTACAGATATCGTGCTGCAGTGTTGATGGACAATAACAAGCAGGAGGAAGCCATTGCGGAACTGTCGAGAGCAATAGCGTTTAAAGCTGATCTGCACCTCTTACATCTACGAGCGGCATTCCATGAACACAAAGGGGATGTATTAGGTGCCCTCAGAGACTGTCGGGCTGCGCTCTCGGTGGACCCGAACCATCAAGAAATGTTGGAACTTCACAGTCGAGTTAACAGCCACGAGCCATGA 2664 0.4291 MRTFFAPDSCKEVQANVLNPQSWLQVERGKLPKLSSQSSSASIESLIKVPDPSIQPFFKPVDYVEVLAEIHEELESCAPQERSNLYLLQYHVFRGLGEVKLMRRSLRAAWQRANTVHEKIIFGAWLKYEKQGEELIADLLKTCGKCAKEFVLIDVASHIPFDVDESLQERLSVNGNHISQYVIFTIGNDKIICDRHKMSELSAPFHAMLKGSFSESLSETIDLSENNISPAGLRAISYFSLRGSLYDVPPNLLLEILAFANKYCCERLKDACDRRLASLISSKEDAVELMDYALDENSHVLAASCLQVLLCDLPNCLNDNRVVGIFTGANRQQLAVMVGPGLFSLYCLLSEVSMNLDPSSDIAVKFLERLVDFAETDKQRLLAFHQLGCVRLLRKEHDEACSLFEGALNAGHIYSVAGLARLDFIKGEKLLSYEKLSSVISSVTPVGWMYQERSLYCEGNNRWEDLEKATDLDPTLIYPYMCRAANLMRTQNVQAALAEINRILGFKLPLECLELRFFLNLALEDYKAALCDVQAILTLRPDYRMFEGRVAASQFCTLVREHVEQWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLARQHASSKHEELVYEGWILYDTGHYEEGLQKAEESISSKRSFEAFFLKAYALADSSLDSSCSSTVISLLEDALRCPSDNLRKGQALNNLGSVFVDSGKLDSAADCYINALEIRHTRAHQGLARVYFFKNDKAAAYNEMTKLIEKAKNNASAYEKRSEYCDRELAKADLEMVTRLDPLRVYPYRYRAAVLMDNNKQEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPNHQEMLELHSRVNSHEP 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1903 887 Gene3D Tetratricopeptide repeat domain 598 785 IPR011990 GO:0005515
Lele14g1903 887 Gene3D Tetratricopeptide repeat domain 786 886 IPR011990 GO:0005515
Lele14g1903 887 SUPERFAMILY TPR-like 463 781 IPR011990 GO:0005515
Lele14g1903 887 Gene3D Tetratricopeptide repeat domain 333 554 IPR011990 GO:0005515
Lele14g1903 887 Gene3D Potassium Channel Kv1.1; Chain A 180 319 IPR011333 -
Lele14g1903 887 Pfam Tetratricopeptide repeat 711 739 IPR019734 GO:0005515
Lele14g1903 887 Coils Coil 755 782 - -
Lele14g1903 887 SUPERFAMILY TPR-like 694 878 IPR011990 GO:0005515
Lele14g1903 887 SMART tpr_5 841 872 IPR019734 GO:0005515
Lele14g1903 887 SMART tpr_5 710 743 IPR019734 GO:0005515
Lele14g1903 887 SMART tpr_5 636 669 IPR019734 GO:0005515
Lele14g1903 887 SMART tpr_5 602 635 IPR019734 GO:0005515
Lele14g1903 887 SMART tpr_5 806 839 IPR019734 GO:0005515
Lele14g1903 887 ProSiteProfiles TPR repeat profile. 710 743 IPR019734 GO:0005515
Lele14g1903 887 PANTHER ETO1-RELATED 1 886 IPR044631 GO:0010105
Lele14g1903 887 SUPERFAMILY POZ domain 182 276 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1903 Lele-ChrLele14 25550731 25554211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1903 711 874 Glycosyltransferase AT3G04240 27.586 1.66e-06 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1309 06 8389379 8391097 Lele14g1903 14 25550731 25554211 CCT
Lele07g1517 07 9324250 9327639 Lele14g1903 14 25550731 25554211 CCT
Lele08g1304 08 8335950 8337417 Lele14g1903 14 25550731 25554211 CCT
Lele14g1903 14 25550731 25554211 Lele15g0428 15 2470690 2474128 hybridization
Lele14g1903 14 25550731 25554211 Lele16g0457 16 2446320 2449800 hybridization