Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1509 ATGTCGAATGATCAGAGGGCTTCCACTAGCCATAGAAGAGAGGAGGATGGCGAAGATGAAGAAGAAATAAGAGAAATCCACGCCTTGTCGCCGCCGCCGCCGCCAGCTAACCTTGGCCGTCGGCGAGATGGTTGGGAAACACATAGCCGCCGATCGTCGTCTCTGTCCGTGACCAGCACTGAAGCCGCTTCCGTCGAGAACTTCACCACCATGAGCAGAGAATTCAGTGCTCTGGTTATAGCAGGATCAAGCATTAACGGCCGTAACTATAGCACTCAGTTAAACGGCCATGAAAACGAAGGGGGCAACAACCTGGGGAGGATCAGAGAAGAGGACATGACGGAGGAGACGAACCCTCTGGCGATCGTACCCGATCGTAACCCGTTAGGAACAAGAGGCGGGTCATCAACTTCAAACGGTGAAGGCGAAGTAACGTCGGTTCAGAGAGTGAAGAAGGAGGAGGTGGAGGCCAAGATATCCGCGTGGCAGAACGCTAAGATTGCTAAGATCAATAATAGGTTCAAGAGAGAAGACGTTGTAATCTCTGGTTGGGAGGGTGACCAGGTTCAGAAAGCTACTTCTTGGATGAAGAAAGTCGAGAGGAAGCTGGAGGAGAAAAGGGCTAGAGCTTTGGAGAAGATGCAAAACGACATCGCAAAAGCTCGGAGGAAAGCTGGGGAGAAAAGGGCGTCAGCGGAAGGCAAAAGAGGAACCAAAGGGACAAAGATCCTCGAGATGGCCAATCTCATGAGAGCAGTTGGAAAATTTCCAGCCAAGAGATCCTTCTTTTAA 792 0.5114 MSNDQRASTSHRREEDGEDEEEIREIHALSPPPPPANLGRRRDGWETHSRRSSSLSVTSTEAASVENFTTMSREFSALVIAGSSINGRNYSTQLNGHENEGGNNLGRIREEDMTEETNPLAIVPDRNPLGTRGGSSTSNGEGEVTSVQRVKKEEVEAKISAWQNAKIAKINNRFKREDVVISGWEGDQVQKATSWMKKVERKLEEKRARALEKMQNDIAKARRKAGEKRASAEGKRGTKGTKILEMANLMRAVGKFPAKRSFF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1509 263 PANTHER OS02G0116800 PROTEIN 52 260 - -
Lele13g1509 263 MobiDBLite consensus disorder prediction 1 62 - -
Lele13g1509 263 Pfam Remorin, C-terminal region 154 258 IPR005516 -
Lele13g1509 263 MobiDBLite consensus disorder prediction 7 27 - -
Lele13g1509 263 Coils Coil 196 231 - -
Lele13g1509 263 MobiDBLite consensus disorder prediction 130 145 - -
Lele13g1509 263 MobiDBLite consensus disorder prediction 220 239 - -
Lele13g1509 263 MobiDBLite consensus disorder prediction 121 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1509 Lele-ChrLele13 24376637 24378016 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0877 05 5396170 5397787 Lele13g1509 13 24376637 24378016 CCT
Lele13g1509 13 24376637 24378016 Lele15g0918 15 5352183 5353574 hybridization
Lele13g1509 13 24376637 24378016 Lele16g0937 16 5316226 5317601 hybridization