Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0877 ATGTTAAACCATCCAACAACCTCCACCGCCAATAATCAACCCCACGACGATCAAGATGAGGAGCAAATCAGAGAAATCCACGCTTTAACCCCACCTCACACTCCACACACCGCCAATCGTGCTCGTCGCAGAGAAGCCTTGGATACACACGCCCGCCCGTCGTCGTCTCTGTCTGTGGCCAGCACGGAAGGAGCTTCCAGTGAGAATTTTACCAGCATGAGCAGGGAATTCAGTGCCTTGGTTCTTGCTGGGTCTAGTATTGATCCCAACAATGGCAGCCCTATTGATGTGCACGACAATGAAGGAGGAGGAAACAATCTGGGGAGAATTGGAGAAGAGGATCTGATGGAGGAGACGAATCCGTTGGCGATCGTGCCTGATAATCATCCGTTGGACCCGGTCCCGTCTCCGAGGAGGGGAGGAGTGACCGGTGCCTCGGGCGGCGGTAGTGGCCAGGGTGAAGTTTCGGTGCAGAGGGTGAAGAAGGAGGAGGTGGAGGCGAAGATATCGGCGTGGCAGAATGCGAAGGTCGCGAAGATCAATAACAGGTTAAAGAGAGAAGACGCTGTAATCAATGGATGGGAAAGCGAGCAGGTCCAGAAAGCTACTTCATGGATGAAGAAAGTCGAGAGGAAACTGGAGGAGAAAAGAGCAAGAGCGTTAGAGAAAATGCAAAACGAAGTAGCAAAAGCCCACAGGAAAGCAGAGGAGAGGAGGGCATCAGCAGAGGGTAAAAGAGGAACCAAAGTAGCAAGAGTCCTTGAGATTGCCAACCTCATGAGAGCTGTTGGAAGACCCCCTGCCAAACGATCCTTCTTCTAA 822 0.5219 MLNHPTTSTANNQPHDDQDEEQIREIHALTPPHTPHTANRARRREALDTHARPSSSLSVASTEGASSENFTSMSREFSALVLAGSSIDPNNGSPIDVHDNEGGGNNLGRIGEEDLMEETNPLAIVPDNHPLDPVPSPRRGGVTGASGGGSGQGEVSVQRVKKEEVEAKISAWQNAKVAKINNRLKREDAVINGWESEQVQKATSWMKKVERKLEEKRARALEKMQNEVAKAHRKAEERRASAEGKRGTKVARVLEIANLMRAVGRPPAKRSFF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0877 273 MobiDBLite consensus disorder prediction 224 247 - -
Lele05g0877 273 MobiDBLite consensus disorder prediction 1 67 - -
Lele05g0877 273 MobiDBLite consensus disorder prediction 128 157 - -
Lele05g0877 273 MobiDBLite consensus disorder prediction 51 67 - -
Lele05g0877 273 PANTHER OS02G0116800 PROTEIN 58 269 - -
Lele05g0877 273 Coils Coil 206 241 - -
Lele05g0877 273 Pfam Remorin, C-terminal region 164 268 IPR005516 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0877 Lele-ChrLele05 5396170 5397787 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0877 05 5396170 5397787 Lele13g1509 13 24376637 24378016 CCT
Lele05g0877 05 5396170 5397787 Lele14g1430 14 22756506 22757878 CCT
Lele05g0877 05 5396170 5397787 Lele15g0918 15 5352183 5353574 CCT
Lele05g0877 05 5396170 5397787 Lele16g0937 16 5316226 5317601 CCT
Lele05g0877 05 5396170 5397787 Lele05g0877 05 5396170 5397787 ECH
Lele05g0877 05 5396170 5397787 Lele07g0918 07 5459201 5460814 hybridization
Lele05g0877 05 5396170 5397787 Lele08g0732 08 4549183 4550841 hybridization