Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0658 ATGGCTGTTGAGGTTGCTGGTTTCGAGATGGTTCAAGGCCCCGTGGACAAAGGTGCTGAACGAGGCAAAGCTGTTTTTTCTGGAAAGGAAAATGGGCATTTAGAAAAGGATCCTGGAGTAGCTGAGTCCATAAAATTTGGGTCACATGAAGACGAACCTACTAAGGAAGGGAATAAAATTTCAGATTCCTTTGCACGAAAAGATGCAGTTGAAGATTGGTCAGCTCCTAAGCAGATACATTCTTTTTATTTTGTTAGGTTTCGGCCATATTTTGATCCTAACATAAAGTCCAGAATTGATCAGCTTGATAAAGAGCTTAGCAAGAAAAATCAAATCCGGTTTCAGCTCATTGAAGCTATAAAGAGAAAGCGGTTTTATGTTTCTGCAATGACTTGGCATGTTAAACTCCATGCATCTAACAAAGAGATTGAACCTCTGCAGCAGGCAATGGGCAAGTTGCGTACACCAAACAATGCAGGTTGGGGTGGTTTATGCTCATCTGAGGAGGAACTGAATGATACTGTATATGGATTGCAGTACCGGATACAACATGAGAGTATTCCATTGTCCGAGGAAAAACAACTTCGTGAAATCAAACAGCTTGAGGGGAAAAGGGAGAGAGTTATTGCTAATGCTTCCATGAGGGCCAAATTACAGGATTCACTGGGGAGGAAAGAAGCCATTCAAGATCAGGACGAACTAACAGGTGTCACTCAGAAGAAGGATACAGCTTATGAGAGCATTCAGCAACGTGAGGAAGGGAATAGCTGTTTCTACCAAAGCCGTGCCGTTTTGAATAAAGCGAGGGAGCTTGATGCGAAGAAAGTTATTAAAGCTTTTGGGGAACTTTCACAAGCAGAGAGAAGAATTTTTCCTTCATTAGATATTCGACAATTGAGTAGGCGGATTAGGAATCCGGATGAAAAGCCACTGTTGGAAGAGTCAAAACCTGTTGAAGCTGATACAATGCCGAAGATCAGCAAAAATCAACTAAAGGAAGAGCCAAAGTCTTCTCCAAAAGATAGTTTGCCAGCTCAGAAGGTTCAGAATGAAGCCAAAAAGAAAGAGAGAGAATTGAAATCTAATCCGAAAAATAAAGAATTAGCAGAAGTTGATAAATTGAAATTTGAAAAGCCACAAAAGTTTATTGTCGTCAAAGAGCCTGAAATTGATCCAGCAAAGTTGAAGATCAAGCGAGAAGAGCAAATTGCAAAAATGAAGCAGGCCTTGGAAAGGAAAACGAAGTTGGCAAAGAAAGCTGCAGCCAAGGCAGCTGTCAGAGCGCAAAAGGAAGCGGAGAAGAAGCTTAAAGAGCGTGAAAAGAAAGCAAAGAAGAGAGCTTCTGCCTCCGCTCCCGATACCAATCCTGAGGAACCCGACGATGTTGTGGTGGAGGCTACAGAACCAGAAAAGTTAGATGAAAATGACGATGCCCCAGTTGCAGTGAAGGAAAAGGTCCAGAAAGAGTGTCCAAAAAAAAAAGGCTGTGACTCGATTCCAAAAGTTATTTTGAAGAAGAGGTCTAAAAATTACTGCTTGTGGGGTGCATCTGCTGCTTTGTTACTATACTATCTTTTGGTTTTAGTCTTTGATGATGATACAGAATCTGTGGGGTGTGAGCATTACTTGAGGTCTGGACTTCTCCATGTCGGGGAACTTCTGGTTACTGTAAACAATGGCCTGAAAATACGTGTAAGCCAGACAGTACAAACTTTGAAGGGACAGGAAGGCGATGTGCTACTCAGGGGAGAAAAAGAGAAAAGCACAATAAAAGAAGTGAAACATATTCTTGACATGGTACCATGCTTCCTTTCTCTTCATTCTAGATTACCTCAAGCGTCTCTTAAGAAGCCTTGGAAGTTGAAACTCTTTCTGTGCTCAAAGAGAATCATCAAGACGAGAAGTTCTTCATACATATTTTCTTACCCCTCCAGTGCTGAAGGAGTCTATGGAAGTAATGGGAAAATTAGCAGGTGTGAAAGCAATTGCTCAATGAGATTATCCACAGGAAACTTTCAGTTTGAACCTTGTTCTCATGGCGACTTCCTTGGTGCAATCCTTGGTACAGGAATCACCAGGGAGAAACTTGGAGATATAATATTGGAGCAGCTAAAGCTGGGCGAACAGGGTTCTCAGATACTTATTGTTCCCAAACTTGTTGATTTTGTCATATCATCAGTTCATCACATGGTTAGTAATGTTTCTGTATCTTGCAGCAAGATACAATTAATTTCTCTTGATTATGAACAACCAAGGTGCAACACTAGTCCTGGTTTCAACTTCTCAATTTAA 2292 0.4123 MAVEVAGFEMVQGPVDKGAERGKAVFSGKENGHLEKDPGVAESIKFGSHEDEPTKEGNKISDSFARKDAVEDWSAPKQIHSFYFVRFRPYFDPNIKSRIDQLDKELSKKNQIRFQLIEAIKRKRFYVSAMTWHVKLHASNKEIEPLQQAMGKLRTPNNAGWGGLCSSEEELNDTVYGLQYRIQHESIPLSEEKQLREIKQLEGKRERVIANASMRAKLQDSLGRKEAIQDQDELTGVTQKKDTAYESIQQREEGNSCFYQSRAVLNKARELDAKKVIKAFGELSQAERRIFPSLDIRQLSRRIRNPDEKPLLEESKPVEADTMPKISKNQLKEEPKSSPKDSLPAQKVQNEAKKKERELKSNPKNKELAEVDKLKFEKPQKFIVVKEPEIDPAKLKIKREEQIAKMKQALERKTKLAKKAAAKAAVRAQKEAEKKLKEREKKAKKRASASAPDTNPEEPDDVVVEATEPEKLDENDDAPVAVKEKVQKECPKKKGCDSIPKVILKKRSKNYCLWGASAALLLYYLLVLVFDDDTESVGCEHYLRSGLLHVGELLVTVNNGLKIRVSQTVQTLKGQEGDVLLRGEKEKSTIKEVKHILDMVPCFLSLHSRLPQASLKKPWKLKLFLCSKRIIKTRSSSYIFSYPSSAEGVYGSNGKISRCESNCSMRLSTGNFQFEPCSHGDFLGAILGTGITREKLGDIILEQLKLGEQGSQILIVPKLVDFVISSVHHMVSNVSVSCSKIQLISLDYEQPRCNTSPGFNFSI 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0658 763 Coils Coil 191 211 - -
Lele12g0658 763 MobiDBLite consensus disorder prediction 307 340 - -
Lele12g0658 763 MobiDBLite consensus disorder prediction 307 372 - -
Lele12g0658 763 MobiDBLite consensus disorder prediction 414 461 - -
Lele12g0658 763 MobiDBLite consensus disorder prediction 27 60 - -
Lele12g0658 763 Pfam Putative RNA-binding domain in YlmH 673 743 IPR040591 -
Lele12g0658 763 MobiDBLite consensus disorder prediction 347 372 - -
Lele12g0658 763 MobiDBLite consensus disorder prediction 414 448 - -
Lele12g0658 763 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 2 231 - -
Lele12g0658 763 Coils Coil 399 447 - -
Lele12g0658 763 Gene3D - 660 746 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0658 Lele-ChrLele12 14875376 14884211 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0658 12 14875376 14884211 Lele12g0658 12 14875376 14884211 ECH
Lele09g0668 09 5088437 5093072 Lele12g0658 12 14875376 14884211 hybridization
Lele10g0611 10 4505322 4514447 Lele12g0658 12 14875376 14884211 hybridization