Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0648 ATGGGGGATCAAAATTTGGACACAGCCAAATCCGTCCTTTACGAAACCCTGAGCCCCTTCTATCTTTCAACACCCAACCAGTCTCCGGTTCCCGATGAATTAGAGCCCTATACTGTTTTCCGGAACCAAATTTCTCTGTCGATCCTTCAATGTCCTTCGCCGGAGACTGCTGCCCCTGATTTCTTTTCTCTCGAAGTTGGCAATGATGATGCTTCTGAGCGAGAATCCCTATCCGTCCAGTTGTCTGAACCAGTTACAGCTGAGCCGAAGACGCCCGCTCTTGTGTCTGAGCCAAAGCTCGAGAGCAGTTGGTTTCGCGGAAATTGCAAGTTCAGGAGTCCCATGCTTCAGCTGCATAAAGAGATAGTAGATTTTTGTGAATTTTTGTCACCCACTTTGGAAGAAAAAGCTGCACGTGATGTGGCAATAGAATCCGTGTTTCAAGTTATAAAACATATATGGCCTCATTCCCAGGTTGAAATTTTTGGGTCTTTCAGGACTGGGCTATATCTTCCTACTAGTGATATTGATGTTGTGATTCTGAAGGCAGGCTTGCCAAGTCCACAGCTTGGCTTGAATGCACTTTCTAGGGCGTTGTCACAAAGGAGCATGGCAAAAAATATCATGGTTATTGGAAAAGCCCGAGTGCCAATTATTAAATTTGTTGAAAAGAAAAGTGGTCTTTCATTTGATGTAAGTTTTGATGTGGATAATGGACCCAAGGCTGCTGATTATATTCAGGAAGCAGTGGCTAGATGGCCACCACTACGGCCTTTATGTTTGATTTTAAAAGTGTTCTTGCAGCAAAGAGAACTAAATGAGGTATATTCTGGTGGTGTTGGTTCTTATGCTCTCCTTGTCATGCTCATGGCAATGCTACGAAATGTCCGAGAGAGCCAAGTATCTGCAGAACACAACTTGGGAGTCCTTTTGGTGAAAGTTTTTGATTTCTATGGACGCAAATTGAACACTGCAGATGTTGGTGTCTCTTGCAATGCGACAGGCACCTTTTTCTTGAAGAGCAAGAAAGGGTTCTTAAACAAGGGACGGCCAAGTCTTTTGGCAATTGAGGATCCCCAGGCACCTGACAATGACATTGGGAAGAACTCGTTTAATTATTTCCAGGTTAGGTCAGCTTTTGCAATGGCTTTCAAAACACTGACCAATCCCAATATCGTCCTGAGCTTAGGCCCCAACAGAAGTATTCTTGGTACTATAATTAGACCAGACCGTGTCTTGTTGGAGCGTAAAGGAGGTTCAAATGGGGACGTAACTTTTAACGCCTTGCTTCCCGGAGCAGGGGAGCCATTACAAGTACAGTATAGGGACCAAGACATCTTATGTAACTGGGATTTTGATGATGAAGAACCCCTGCCTCGGGGAGGCGATTCTGCTGGGGATAAAAGCACTTCAGGAAAGAAGAGAAAACCTCTATCTAGGGAAAATCCCAAAAAGAAGCTAAAGGAAATGATGAGGAATGGAGAGAATGTCTCGGGGAAAGAAAACAGTAGTAAAAAGAAAAGTAGGATAAAACTATGA 1539 0.4392 MGDQNLDTAKSVLYETLSPFYLSTPNQSPVPDELEPYTVFRNQISLSILQCPSPETAAPDFFSLEVGNDDASERESLSVQLSEPVTAEPKTPALVSEPKLESSWFRGNCKFRSPMLQLHKEIVDFCEFLSPTLEEKAARDVAIESVFQVIKHIWPHSQVEIFGSFRTGLYLPTSDIDVVILKAGLPSPQLGLNALSRALSQRSMAKNIMVIGKARVPIIKFVEKKSGLSFDVSFDVDNGPKAADYIQEAVARWPPLRPLCLILKVFLQQRELNEVYSGGVGSYALLVMLMAMLRNVRESQVSAEHNLGVLLVKVFDFYGRKLNTADVGVSCNATGTFFLKSKKGFLNKGRPSLLAIEDPQAPDNDIGKNSFNYFQVRSAFAMAFKTLTNPNIVLSLGPNRSILGTIIRPDRVLLERKGGSNGDVTFNALLPGAGEPLQVQYRDQDILCNWDFDDEEPLPRGGDSAGDKSTSGKKRKPLSRENPKKKLKEMMRNGENVSGKENSSKKKSRIKL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0648 512 Gene3D Beta Polymerase, domain 2 131 239 IPR043519 -
Lele12g0648 512 Gene3D - 115 389 - -
Lele12g0648 512 SUPERFAMILY Nucleotidyltransferase 111 266 IPR043519 -
Lele12g0648 512 MobiDBLite consensus disorder prediction 453 505 - -
Lele12g0648 512 Pfam Cid1 family poly A polymerase 306 364 IPR002058 -
Lele12g0648 512 PANTHER POLY(A) RNA POLYMERASE 85 479 IPR045862 GO:0004652|GO:0031499|GO:0043631
Lele12g0648 512 FunFam Poly(A) RNA polymerase cid14 232 389 - -
Lele12g0648 512 CDD NT_PAP_TUTase 138 248 - -
Lele12g0648 512 FunFam non-canonical poly(A) RNA polymerase PAPD5 131 239 - -
Lele12g0648 512 SUPERFAMILY PAP/OAS1 substrate-binding domain 254 393 - -
Lele12g0648 512 Pfam Nucleotidyltransferase domain 146 234 IPR002934 GO:0016779
Lele12g0648 512 MobiDBLite consensus disorder prediction 452 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0648 Lele-ChrLele12 14804268 14809855 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0648 12 14804268 14809855 Lele12g0648 12 14804268 14809855 ECH
Lele09g0679 09 5151219 5155467 Lele12g0648 12 14804268 14809855 hybridization
Lele10g0619 10 4574351 4578641 Lele12g0648 12 14804268 14809855 hybridization