Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0679 ATGGAGGTTGAAAATTTGGACACCCCCAAATCCATCCTTTACGAAACCCTGAGTCCCTTCTATCCTTCAAGCCCCAACCAGTCTCCGGTTCCGGATGAACTAGAGCCCTATACTGTTTTCCGGAACGAAATTTCTCTATCGACCCTTCAATGGCCTTCGCCGGAAACTGCTGCCCCTGATTTCTTTTCTCTCGAAGTTGGCAATGATGATGCTTCTGAGCGAGAATCCCTATCTGTCCAATTGCCTGAACCAGTTGCAGCAACTGAGCCGAAGACGCCGGTCCTTGTGTCTGAGCCAAAGCTTGAGAGCAGTTGGTTTCGTGGAAACTGCAAGTTCAGGAGTCCCATGCTTCAGCTGCATAAAGAGATAATAGATTTTTGTGAATTTTTGTCACCTACTCTAGAAGAAAAAGCTGCACGCGATGTGGCAATAGAATCTGTGTTTCAAGTTATAAAACATATATGGCCTCATTCCCAGGTCGAAGTTTTTGGGTCTTTCAGGACTGGGCTATATCTTCCAACTAGTGATATTGATGTAAGTTTTGTTGCTTCTCTGGTTGTGATTCTGAAGGCAGGCTTGCCAAGTCCACAGCTTGGCTTAAATGCACTTTCTCGGGCATTGTCACAAAGGGGCATGGCAAAAAATATCATGGTCATTGGAAAGGCTCGAGTGCCAATTATTAAATTTGTTGAAAAGAAAAGTGGTCTTTCATTTGATGTAAGTTTTGATGTGGATAATGGACCCAAGGCGGCTGATTATATTCAGGAAGCAGTGGCTAGATGGCCACCACTACGGCCTTTATGTTTGATTTTAAAAGTGTTCTTGCAGCAAAGAGAACTTAACGAGGTATATTCTGGTGGGATTGGTTCTTATGCTCTCCTTGTCATGCTCATGGCAATGCTACGAAATGTCCGTGAGAGCCAAGTATCTGCAGAACACAACCTGGGAGTCCTTTTGGTGAAATTTTTTGAGTTCTATGGACGCAAATTGAACACTGCAGATGTTGGTGTCTCTTGCAATGGGACAGGCACCTTTTTCTTGAAGAGCAACAAAGGGTTTTTAAATAAGGGACGGCCAAGTCTTTTGGCAATTGAGGATCCCCAGGCACCTGACAATGACATCGGGAAGAACTCGTTTAACTATTTCCAGGTTAGGTCAGCATTTGCAATGGCTTTCAAAACACTGACCAATCCCAATATGGTCCTGAGCTTAGGCCCCAACAGAAGTATCCTTGGAACTATAATTAGACCAGACCGGGTCTTGCTGGAGCGCAAGGGGGGTTCAAACGGGGACGTAACTTTTGACGCCTTGCTTCCCGGAGCAGGCGAGCCATTACAAGTGCAGTATGGAGACCAAGATATCTTATGTAACTGGGACTTTGATGATGAAGAACCCTTGCCTCGGGGAGGCGATTCTGCTGGGGATAAAAGCACTTCAGGGAAGAAGAGAAAATCTCTATCTAGGGAAAATCCCAAAAAGAAGCTAAAGGAAATGATGAGGAATGGAGATAATGTATCGGGGAAAGAAAACAGTAGTAAAAAGAAAAGTAGGAGAAAACTATGA 1563 0.4453 MEVENLDTPKSILYETLSPFYPSSPNQSPVPDELEPYTVFRNEISLSTLQWPSPETAAPDFFSLEVGNDDASERESLSVQLPEPVAATEPKTPVLVSEPKLESSWFRGNCKFRSPMLQLHKEIIDFCEFLSPTLEEKAARDVAIESVFQVIKHIWPHSQVEVFGSFRTGLYLPTSDIDVSFVASLVVILKAGLPSPQLGLNALSRALSQRGMAKNIMVIGKARVPIIKFVEKKSGLSFDVSFDVDNGPKAADYIQEAVARWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLVMLMAMLRNVRESQVSAEHNLGVLLVKFFEFYGRKLNTADVGVSCNGTGTFFLKSNKGFLNKGRPSLLAIEDPQAPDNDIGKNSFNYFQVRSAFAMAFKTLTNPNMVLSLGPNRSILGTIIRPDRVLLERKGGSNGDVTFDALLPGAGEPLQVQYGDQDILCNWDFDDEEPLPRGGDSAGDKSTSGKKRKSLSRENPKKKLKEMMRNGDNVSGKENSSKKKSRRKL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0679 520 PANTHER POLY(A) RNA POLYMERASE 86 487 IPR045862 GO:0004652|GO:0031499|GO:0043631
Lele09g0679 520 SUPERFAMILY Nucleotidyltransferase 112 274 IPR043519 -
Lele09g0679 520 FunFam Poly(A) RNA polymerase cid14 240 397 - -
Lele09g0679 520 CDD NT_PAP_TUTase 139 256 - -
Lele09g0679 520 MobiDBLite consensus disorder prediction 461 511 - -
Lele09g0679 520 Pfam Nucleotidyltransferase domain 147 242 IPR002934 GO:0016779
Lele09g0679 520 MobiDBLite consensus disorder prediction 460 520 - -
Lele09g0679 520 Gene3D Beta Polymerase, domain 2 132 247 IPR043519 -
Lele09g0679 520 FunFam non-canonical poly(A) RNA polymerase PAPD5 132 247 - -
Lele09g0679 520 Pfam Cid1 family poly A polymerase 314 372 IPR002058 -
Lele09g0679 520 Gene3D - 116 397 - -
Lele09g0679 520 SUPERFAMILY PAP/OAS1 substrate-binding domain 262 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0679 Lele-ChrLele09 5151219 5155467 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0679 09 5151219 5155467 Lele09g0679 09 5151219 5155467 ECH
Lele09g0679 09 5151219 5155467 Lele11g0692 11 6571952 6576165 hybridization
Lele09g0679 09 5151219 5155467 Lele12g0648 12 14804268 14809855 hybridization