Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0698 ATGTGGAAAAATGAAGCTAATTGCAGACCCAACAGAACCAAAGGCGTCACCATCACTCAGTCATATGAGCATTTTCATCGTAGAGATGTGTCAGTGGCTATTCCTTGGCCTGGGATGGGTGATGCGTGGGAAATGCAAGAGACTTTATCTGGTGAACAAACTGGGGCAGATAGTATCCTCGACCAGGTCTCGTCGGGGAATCATCCCCCAACCTCATTAGATGAGGCATTAGGGGCCAACAATGGTTCACTTCGTGGAACTATAGCTAATGCTACAAACAGTTATGTTTTTGACAGAATTTCGGCAACATGGCCGGAGGAAAAACTTGTTCTTGCTGCCAGGAGACGAAGCCCTCGAGTTTGTGTGGATATCTCAGACGGGGTTAATCAAAACATTTCCATGGCTCTCCAGGCAGCAGCTGCTTCCATGGTTCCTGCTTCTTTCTCCATTCCTAAAGAGGGAAAATCTGGTGTTTCTCTCAAGGACTCTTCCCTATTTGGGCTTTCATTATCAGATAATCTCAGAGCTGACTTCAGCTCTTGTGCATTGAGATGCAAGCAAAAAGTAGGAGCTGTGAGAGCTCAGACAGTGGCTACTACAACTCCAGCAGTTAACAAGGCTTCACCTGAAGGCAAGAAAACTCTGAGGAAGGGAAGTGTTGTGATAACTGGGGCCTCCTCTGGTTTGGGTCTGGCTACTGCTAAGGCTTTGGCTGAAACAGGAAAATGGCATGTGATTATGGCCTGCAGGGACTTCCTCAAAGCCGAAAGAGCTGCCAAGTCGGCCGGCATGCTAAAGGAAAACTACACCATTATGCACTTAGACCTTGCCTCTCTTGACAGTGTCCGTCAATTTGCTGATAGCGTCAAGCGATCCGGCAGACCACTCGATGTTCTGGTCTGCAATGCTGCTGTTTACTTGCCAACTGCTAAGGAACCTACATTTACTGCTGAAGGATTTGAGCTCAGTGTTGGGACAAACCATCTGGGGCATTTTCTCCTTTCACGCTTGCTGCTCGAGGACTTGAACAAATCTGATTATCCTTCAAAGCGCTTGATCATCGTGGGCTCAATCACAGGAAACACGAACACACTGGCTGGAAACGTGCCTCCCAAGGCAAATCTTGGTGACTTGAGGGGACTTGCAGGTGGATTGAATGGACTAAACACTTCATCTATGATTGATGGGGGAGATTTTGATGGCGCCAAGGCGTACAAGGACAGTAAAGTCTGCAATATGCTCACCATGCAAGAGTTCCATCGAAGGTACCATGAGGAAACCGGGATCACATTCGCTTCCCTGTACCCGGGTTGCATAGCCACGACTGGCTTGTTCAGAGAACACATTCCATTGTTTAGACTTTTGTTTCCTCCATTCCAAAAATACATAACCAAGGGCTATGTCTCAGAAGATGAAGCAGGAAAAAGACTTGCTCAGGTTGTAAGTGATCCAAGTCTGACAAAATCTGGTGTTTACTGGAGCTGGAATAAGGCCTCTGCTTCATTTGAAAACCAGTTGTCACAAGAGGCTAGTGATCCAGAGAAGGCTCTCAAGGTGTGGGAGATTAGTGAGAAACTTGTTGGCTTGGCTTAA 1593 0.4708 MWKNEANCRPNRTKGVTITQSYEHFHRRDVSVAIPWPGMGDAWEMQETLSGEQTGADSILDQVSSGNHPPTSLDEALGANNGSLRGTIANATNSYVFDRISATWPEEKLVLAARRRSPRVCVDISDGVNQNISMALQAAAASMVPASFSIPKEGKSGVSLKDSSLFGLSLSDNLRADFSSCALRCKQKVGAVRAQTVATTTPAVNKASPEGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMLKENYTIMHLDLASLDSVRQFADSVKRSGRPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLSRLLLEDLNKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNTSSMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEDEAGKRLAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDPEKALKVWEISEKLVGLA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0698 530 CDD LPOR_like_SDR_c_like 217 529 - -
Lele11g0698 530 PANTHER PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC 134 530 IPR005979 GO:0016630
Lele11g0698 530 TIGRFAM LPOR: light-dependent protochlorophyllide reductase 216 530 IPR005979 GO:0016630
Lele11g0698 530 Gene3D - 205 530 - -
Lele11g0698 530 Pfam short chain dehydrogenase 220 362 IPR002347 -
Lele11g0698 530 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 215 496 IPR036291 -
Lele11g0698 530 PRINTS Glucose/ribitol dehydrogenase family signature 427 444 IPR002347 -
Lele11g0698 530 PRINTS Glucose/ribitol dehydrogenase family signature 294 305 IPR002347 -
Lele11g0698 530 PRINTS Glucose/ribitol dehydrogenase family signature 219 236 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0698 Lele-ChrLele11 6633940 6637617 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0698 11 6633940 6637617 Lele11g0698 11 6633940 6637617 ECH
Lele09g0688 09 5228261 5230172 Lele11g0698 11 6633940 6637617 hybridization
Lele10g0627 10 4634934 4636884 Lele11g0698 11 6633940 6637617 hybridization