Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g0682 ATGGCTGCCGCTAGCTTGGTAACGCCCCGATTTCTGAGCAGAGCAGCTCAGTCTTTTGCATCCTCTACTCTTCTTCGTTACAACGCTAAACTCTCTTTTCGAAGGACAATTTCTTCTGACCCTTTCGATGTTTCTTGTCCTTCAGCTTCAGGTGTAAGCCAGACAGTACAAGCTTTGAAGGGACAGGAAGGTGATGTGCTACTCAGGGGAGTAAAAGAGAAAAGCACAATAAAAGAAGTGAAGCATATTCTTGAGATGGCTCAAAGGGCATCATCAAGACGAGAAGTTCTTCATACAAATTTTCTTACCCCTCCAGTGATGAAGGAATCTATGGAAGTAATGGGAAAATTAGCAGGTGTGAAAGCAATTGCTCAAGGAGGTTATCCACAGGCTGAACGCTGCCGGATTTCTGTTGGACATCCAGAAGAATTGACAAGTGACCCAGATATAATCGCAGCACTGAGCATTACAGGAAACTTCCAGTTTGAACCTTGTTCTCATGGCGACTTCCTTGGCGCAATCCTTGGTACGGGAATCACCAGGGAGAAACTTGGAGATATAATATTGCAGGGTGAACAGGGTGCTCAGATACTTATTGTTCCGGAACTTGTTGATTACGTCATATCATCACTGGGTAAGGTTGGCAATGTTTCTGTATCTTGCAGCAAGATACCATTAATTTCTCTTGATTATGAACCACCAAGAACCAAGTCATTTAAAACCGTAGAAGCATCATTAAGGGTTGATGCATTAGCAAGTGCTGGGTTCAAAATTTCACGTTCAAAATTAGTTGACCTGATCAGCGATGGGGCTGTTCGTGTAAACTGGGTCCCTGTAACTACCAAAGGAGCCACGCTCAAGAGTGGAGATATTGTATCTGTTAGTGGAAGGGGAAGATTAAAGATAGGAGAAATAAACTCAACAAAGAAAGGAAAGTTTGCAGTGGAGTTGATTCGTTATTTTTGTTCTCCATTGAGGGAAATGATCCTTCCGGTGCAAGATATGTTCCCGTCTGAAAATAATGGAAAGAAACAGCATTGA 1041 0.4275 MAAASLVTPRFLSRAAQSFASSTLLRYNAKLSFRRTISSDPFDVSCPSASGVSQTVQALKGQEGDVLLRGVKEKSTIKEVKHILEMAQRASSRREVLHTNFLTPPVMKESMEVMGKLAGVKAIAQGGYPQAERCRISVGHPEELTSDPDIIAALSITGNFQFEPCSHGDFLGAILGTGITREKLGDIILQGEQGAQILIVPELVDYVISSLGKVGNVSVSCSKIPLISLDYEPPRTKSFKTVEASLRVDALASAGFKISRSKLVDLISDGAVRVNWVPVTTKGATLKSGDIVSVSGRGRLKIGEINSTKKGKFAVELIRYFCSPLREMILPVQDMFPSENNGKKQH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g0682 346 PANTHER UNCHARACTERIZED 229 320 IPR039167 -
Lele11g0682 346 Gene3D - 240 297 IPR036986 GO:0003723
Lele11g0682 346 Gene3D - 147 229 IPR012677 -
Lele11g0682 346 TIGRFAM PS_II_S4: photosystem II S4 domain protein 75 319 IPR017506 -
Lele11g0682 346 Pfam Putative RNA-binding domain in YlmH 152 226 IPR040591 -
Lele11g0682 346 SUPERFAMILY Alpha-L RNA-binding motif 105 310 - -
Lele11g0682 346 Gene3D - 72 139 - -
Lele11g0682 346 SMART s4_6 246 303 IPR002942 GO:0003723
Lele11g0682 346 CDD S4 247 301 - -
Lele11g0682 346 Pfam S4 domain 250 292 IPR002942 GO:0003723
Lele11g0682 346 ProSiteProfiles S4 RNA-binding domain profile. 246 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g0682 Lele-ChrLele11 6492634 6496969 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0682 11 6492634 6496969 Lele11g0682 11 6492634 6496969 ECH
Lele09g0667 09 5078098 5087598 Lele11g0682 11 6492634 6496969 hybridization