Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1050 ATGGAGTTAGAAAGCATACTCCATTTCCTTCATGACAAGACAATTTTAGTGACTGGTGCTACCGGCTTTCTCGCCAAAATTTTTGTGGAGAAGATACTGAGGGTTCAGCCAAATGTCAAGAAATTATACCTTCTTTTGAGAGCTTCTGATAACATATCTGCCACGCGACGCTTGAATGACGAGATCACAGGGAAGGAGTTGTTCAAATTGTTGAAGGGGAATCATGGTGCAGAGTTCAATTCCTTTATCTCAAAGAAGGTGACTCTGGTTCCTGGGGACCTCTCTCTTGAGGACTTGAATATCAAGGACTCCGTTCTAAGGGAAGAGATTTGCAGTCAAACAGATGCTATTGTAAACTTAGCTGCAACAACCAACTTTGATGAAAGATACGATGTTGCATTGGGCTTAAATACCTTGGGAGCTAAGCATGTTTTGAGCTTCGCCAAACAATGTTCTAAACTGAAGGTGCTGGTCCACGTCTCAACAGCTTACGTATGTGGGGAGAGCGGAGGACTAATAGCAGAGGATCCTTATAAAATGGGGGAATCACTAAATGGAGCGTCTGGATTAAACGTTGACGCTGAGAAGAAATTGGTACAAGAAACTCTGAAACAGCTTCAAGATGAGGGAGCCACAGAATATGAAATTAAAGACGCCATGAAGGACCTGGGTCTAAAAAGGGCAAATATATATGGATGGCCAAACACGTACGTGTTTACAAAGGCATTAGGAGAAATGCTTGTGGGAGAATTGAAGGGAAACCTACCTGTTGTCATTATACGTCCCACCATCGTTACAAGCACTTTCAAAGAACCTTTTCCTGGTTGGGTTGAAGGTGTAAGAACCATAGACAGTTTGATTGTTGCATATGGCAAAGGAAAACTAAGTTTTTTTCCGGCGGCAATCGATGCAGTTTTCGACGTGATACCAGCTGACATGGTGGTGAATGCAATGTTAGTGGCAATGGTGGCTCATGCGAATGAGGCAGATGATAAAATATATCACGTGGGTTCCTCCATGAGAAATCCAGTAAGATACTCCAATCTCAGAGACTATGGCCTAAGATACTTCACATCAAAGCCACTGAGGAACAAGGACGGAAAGATTGTGAAAGTTGGCAATGTTACTATATTAAGCAGCATGGACAGCTTCCGCAAGTACATGTTCATTCGCTATATGCTTCTCTTGAAGGGGCTAGAGCTGGCGAATAAAGCATTTTGTCAGTATTTTCGGGGGAAGTATCTTGAACTAAACAGGAAGATTCAGATAGTGATGCGATTGGTTGATCTTTACAGGCCTTACTTATTTGATAATATGAACACGGAGAAGTTGCGAGTGGCGGCGACGGAGAGTGGGGTAGAGATGGATATGTTCTATTTTGACTCAAAGATGATCGATTGGGAGGTTTATTTCATGAACGTACACATCCCTGGCCTCATTAAGTACGTTCTCAAGTGA 1458 0.4266 MELESILHFLHDKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDNISATRRLNDEITGKELFKLLKGNHGAEFNSFISKKVTLVPGDLSLEDLNIKDSVLREEICSQTDAIVNLAATTNFDERYDVALGLNTLGAKHVLSFAKQCSKLKVLVHVSTAYVCGESGGLIAEDPYKMGESLNGASGLNVDAEKKLVQETLKQLQDEGATEYEIKDAMKDLGLKRANIYGWPNTYVFTKALGEMLVGELKGNLPVVIIRPTIVTSTFKEPFPGWVEGVRTIDSLIVAYGKGKLSFFPAAIDAVFDVIPADMVVNAMLVAMVAHANEADDKIYHVGSSMRNPVRYSNLRDYGLRYFTSKPLRNKDGKIVKVGNVTILSSMDSFRKYMFIRYMLLLKGLELANKAFCQYFRGKYLELNRKIQIVMRLVDLYRPYLFDNMNTEKLRVAATESGVEMDMFYFDSKMIDWEVYFMNVHIPGLIKYVLK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1050 485 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Lele10g1050 485 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 485 IPR026055 GO:0080019
Lele10g1050 485 CDD FAR-N_SDR_e 13 361 - -
Lele10g1050 485 CDD FAR_C 390 484 IPR033640 -
Lele10g1050 485 Pfam Male sterility protein 17 318 IPR013120 -
Lele10g1050 485 Gene3D - 8 376 - -
Lele10g1050 485 Pfam Male sterility protein 392 485 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1050 Lele-ChrLele10 21800390 21803854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1050 113 484 Acyl Lipid Metabolism Gene Families AT4G33790 61.804 2.19e-175 496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1050 10 21800390 21803854 Lele11g1082 11 18075413 18079685 hybridization