Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0630 ATGCGAATAGGAGCAATGACAAAAAGAGCTCTTCGAATTCGCGTAGCGCCGCTACAGTGCGGCGGCTTAATATGTACAATACCAGACCCCGTTCGGGATCTTAAAGGGAAAATCTTGAGGAACGAGTTTCAATCAAAGGACTTGCCAAGTACACGAATTCAACCCGACCGCCGATGGTTTGGAAACTCTTGGGTTGTAAATCAAAAGGAGCTTGAATTTTTCCGGGAGGAGCTTCAAAATCGCATGTCAAGTAATTACAATGTCATACTGAAAGGAAAGAATCTGCCTATGTCTCTCCTCAACGATCACCAACAGCAAGCAAGAGTTCACCTTCTTGATAGAGAGCCTTTTGCGGGTGCATTTGGACCTAAGAAAAAAACGAAGCGCCCAAACCTCTTGGCAGGAGATTATGAATCCCTAGCTAAGAAAGCTGATGGTTCTCAAGAGGCTTTTGAACAGAAGTATGGTGCTAGTGTATCTGCAGAAGGTAATGACGATGATGGATTTAGGGATTTAGTGCGGCATACAATGTTTGAAAAAGGTCAAAGTAAACGTATATGGGGTGAACTCTACAAAGTCATAGATTCTTCTGATGTCGTTGTCCAGGTAAAATCTATTTTAGTGCTTGGACTTTTGGGAGGTTTTAGATGCAAGGAACCCGCAAGGCACAAGATGTTACCATTTAGAGAAGCATTTGAAGGAAAATTGCAAGCACAAGCACATGGTTCTCTTGCTAAACAAGGTTGGGTGCATCCTGTTGTGGAATATTTGTGTGCTTGGTTGCTGTGGTATCACATCTCTCTTTCCTCTCCCTTAACTACATTTTTATTGGTCATTGTGCTTAGGGTTCACTTCTGTCAGTTGAGACAATTTGCCCGATTAAAAAGTGAAAAGCAAGCAATTTCTGTGGGATTCATTGGATATCCAAATGTTGGGAAGTCTTCAGTGATCAACACATTACGTTACAAAGAATGTGTTGTTCATCAGAACAAGGATTCTGAAACAGATATTGTGCTCAAGGGTGTGAAACTGCAAAATCCGATTGTCTTTACAAGTTTTCAAATGTCTGCCTGTTTGGCTTGCGGCTTGTTCAATGGTTTGTTCATTCTTTTGCTTGCCCTGTGGAATGATAAGGCCACATGA 1143 0.4191 MRIGAMTKRALRIRVAPLQCGGLICTIPDPVRDLKGKILRNEFQSKDLPSTRIQPDRRWFGNSWVVNQKELEFFREELQNRMSSNYNVILKGKNLPMSLLNDHQQQARVHLLDREPFAGAFGPKKKTKRPNLLAGDYESLAKKADGSQEAFEQKYGASVSAEGNDDDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVKSILVLGLLGGFRCKEPARHKMLPFREAFEGKLQAQAHGSLAKQGWVHPVVEYLCAWLLWYHISLSSPLTTFLLVIVLRVHFCQLRQFARLKSEKQAISVGFIGYPNVGKSSVINTLRYKECVVHQNKDSETDIVLKGVKLQNPIVFTSFQMSACLACGLFNGLFILLLALWNDKAT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0630 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 331 IPR027417 -
Lele10g0630 380 Pfam NGP1NT (NUC091) domain 30 149 IPR012971 -
Lele10g0630 380 Gene3D - 276 351 IPR027417 -
Lele10g0630 380 Pfam 50S ribosome-binding GTPase 303 336 IPR006073 GO:0005525
Lele10g0630 380 PANTHER GTP-BINDING PROTEIN-RELATED 287 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0630 Lele-ChrLele10 4649166 4652926 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0630 10 4649166 4652926 Lele10g0630 10 4649166 4652926 ECH
Lele10g0630 10 4649166 4652926 Lele11g0701 11 6654298 6660057 hybridization
Lele10g0630 10 4649166 4652926 Lele12g0636 12 14724650 14728476 hybridization