Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1083 ATGCTTCATTTCGTTCAGGACAAGACCATTTTAGTGACTGGTGCCACCGGCTTTCTTGCCAAAATTTTTGTGGAGAAGATACTGAGGGTTCAGCCTAAAGTCAAGAAATTATACCTTCTTTTGAGAGCATCTGATAACATATCTGCCATACGACGCTTGAATGATGAGATCATAGGAAAGGAGTTGTTCAAATTGTTGAAGGAGAATCATGGTGAAGAGTTCAATTCCTTTATCTCAAAGAAGGTGACTCTGGTTACTGGGGACATCTCTCTTGATGACTTGAATATCAAGGACTCCGTTCTAAAGGAAGAGATTTGCAGTCAAACAGATGCTATAGTTAACTTAGCTGCAGCAACTAAATTTGATGAAAGATACGATGTTGCATTGGGCTTAAATACCTTTGGAGCTAAGAATGTTTTGAGCTTCGCCAAAGAATGTAATAAACTGAAGGTGCTGGCCCACGTCTCCACAGCATACGTATGTGGGGAGAAAGGAGGACTAATAGCAGAGGATCCCTATAAAATGGGTGAATCACTAAATGAAGTGTCTGGACTAAACATTGATGCTGAGAAGAAATTGGTACAAGAAACTCTGAAACAGCTTCAAGATGAGGGAACCACAGAATATGAAACTAAAGTCGCCATGAGGGAATTGGGTCTTAAAAGGGCAAATATATATGGATGGCCAAACACGTACGTCTTCACAAAAGCAATGGGAGAAATGCTTGTGGGAGAATTGAAGGGAAACGTACCTGTTGTCATTATACGTCCCAGCATCGTTACAAGCACTTACAAGGAACCTTTTCCTGGTTGGGTTGAAGGTGTAAGAACCATAGACAGTTTGATTGTTGCATATGGCAAAGGAAAACTAAGTTGTTTTCCGGCGGAACTCGACGCAGTTTTCGACGCTATACCAGCGGACATGGTGGTGAATGCTTTGTTGGTGGCGATGGTGGCTCATGCGAATGAGTCAAATGAAATAATATATCACGTAGGTTCCTCCATGAGAAATCCAGTGAGATACTCCAATCTCAGAGACTATGCATTAAGATACTTCACATCAAAGCCACTTAGGAACAAAGACGGCAAGATTGTGAAAGTTGGCAATGTTACTGTATTAAACAGCATGGACAGCTTCCGCACGTACATGTTCATTCGCTATATGCTTCTCTTGAAGGGGCTAGAGCTGGCCAATAAGGCATTTTGTCAGTATTTTCGAGGGAAGTATGTTGACCTAAACAGGCAGATTCAGATAGTGATGCGGTTGGTTGATCTTTACAGGCCTTACTTGTTCTTCAATGGCGTATTTGATAATATGAACACGGAGAAGTTAAGAGTGGCGGCGACGCAGAGTGGGGTAGAGATGGAAATGTTCTATTTTGACTCAAAGATGATTGATTGGGAAGTTTATTTCATGAACATACATATCCCTGGCCTCATTAAGTACGTTCTCAAGTGA 1458 0.4156 MLHFVQDKTILVTGATGFLAKIFVEKILRVQPKVKKLYLLLRASDNISAIRRLNDEIIGKELFKLLKENHGEEFNSFISKKVTLVTGDISLDDLNIKDSVLKEEICSQTDAIVNLAAATKFDERYDVALGLNTFGAKNVLSFAKECNKLKVLAHVSTAYVCGEKGGLIAEDPYKMGESLNEVSGLNIDAEKKLVQETLKQLQDEGTTEYETKVAMRELGLKRANIYGWPNTYVFTKAMGEMLVGELKGNVPVVIIRPSIVTSTYKEPFPGWVEGVRTIDSLIVAYGKGKLSCFPAELDAVFDAIPADMVVNALLVAMVAHANESNEIIYHVGSSMRNPVRYSNLRDYALRYFTSKPLRNKDGKIVKVGNVTVLNSMDSFRTYMFIRYMLLLKGLELANKAFCQYFRGKYVDLNRQIQIVMRLVDLYRPYLFFNGVFDNMNTEKLRVAATQSGVEMEMFYFDSKMIDWEVYFMNIHIPGLIKYVLK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1083 485 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 333 IPR036291 -
Lele09g1083 485 Pfam Male sterility protein 12 312 IPR013120 -
Lele09g1083 485 Pfam Male sterility protein 387 485 IPR033640 -
Lele09g1083 485 CDD FAR-N_SDR_e 8 356 - -
Lele09g1083 485 Gene3D - 4 376 - -
Lele09g1083 485 CDD FAR_C 385 484 IPR033640 -
Lele09g1083 485 PANTHER MALE STERILITY PROTEIN 2-RELATED 3 485 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1083 Lele-ChrLele09 20022099 20025661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g1083 108 484 Acyl Lipid Metabolism Gene Families AT4G33790 62.069 6.13e-179 504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1083 09 20022099 20025661 Lele11g1082 11 18075413 18079685 hybridization