Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0691 ATGACAAAGAAGGAGAAGAAGGTGAACGTGTCCGGAAAACCAAAGCACTCGCTCGATGCGAATAGGAGCAATGACAAAAAGAGCTCTTCGAATTCGCGTAGCGCCGCTACAGTGCGGCGGCTTAATATGTACAATACCAGACCCGTGCGGGATCGTAAAGGGAAACTCTTGAGAAACGAGTTTCAATCAAAGGACCTGCCAAGTACACGAATTCAACCCGACCGCCGATGGTTTGGAAACACTCGGGTTGTAAATCAAAAGGAGCTTGAATTTTTCCGAGAGGAGCTTCAAAATCGCATGTCAAGTAATTACAATGTCATACTGAAAGGAAAGAATCTGCCCATGTCTCTCCTGAACGATCACCAAAAGCAATCAAGAGTTCACCTTCTTGATAGAGAGCCTTTTGAGGATGCATTTGGACCTAAGACAAAAAGGAAGCGCCCAAACCTCTTGGCAGCAGATTATGAATCCCTAGCTAAGAAAGCTGATGGTTCTCAAGAGGCTTTTGAAGAGAAGTATGGGGCTAGTGTATCTGCAGAAGGTAATGATGATGATGGATTTAGGGATTTAGTGCGGCATACAATGTTTGAAAAAGGTCAAAGTAAACGTATATGGGGAGAACTCTACAAAGTCATAGATTCTTCTGATGTTGTTGTCCAGGTTTTAGATGCAAGGGACCCGCAAGGCACAAGATGTTACCATTTAGAGAAGCATTTGAAGGAAAATTGCAAGCACAAGCACATGGTTCTTTTGCTAAACAAGTGCGATTTAATTCCTGCTTGGGCAACAAAGGGGTGGCTTAGAGTTTTGTCAAGAGAGTATCCTACTCTAGCCTTCCACGCCAGTATTAACAAGTCCTTTGGAAAGGGTTCACTTCTGTCAGTTTTGAGACAATTTGCCCGATTAAAAAGTGACAAGCAAGCAATTTCTGTGGGATTCATTGGATATCCAAATGTTGGGAAGTCTTCAGTGATCAACACATTACGTACAAAGAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAAACAAAAGTCTGGCAATACATAACTCTTACGAAGAGAATCTTTTTGATTGACTGCCCTGGTGTTGTTTATCAGAACAAGGATTCTGAAACAGATATTGTGCTGAAGGGTGTGGTACGCGTGACAAACTTGCAAGATGCTTCAGAACATATAGGTGAAGTTTTAAAACGTGTGAAGAAGGAGCACTTGGAAAGGGCATATAAGATATCGCAATGGGATGATGAGACTGACTTTCTAGTTCAGCTTAGCAAAGCAACTGGCAAACTCTTAAAGGGTGGAGAGCCTGACCTGATGACTGCAGCTAAGATGGTGCTTCATGACTGGCAGAGGGGCAGGATTCCCTTTTTCGTTCCCCCACCACGTAAGGATGACTTATCTGAGGAAGAACCCAATGTTAATGGTGTGGATGTTGACACCGGTGTTGACAGCAATCAGGCATCTGCAGCTCTTAAAGCCATAGCAAATGTTCTTTCATCTCAGCAGCAAAGAAGCGTACCTGTTCAGAGGGATTTATTTAGCGAGAAAGAGTTGGAGGAGGAGACTGCAGACCAACTTCCCAGCACTCAGGATAATACGGATGAAGAGATTTCAACTCCTAATAGTGACTCGGCTGAGCAAAGTCCAGTTTAG 1653 0.4374 MTKKEKKVNVSGKPKHSLDANRSNDKKSSSNSRSAATVRRLNMYNTRPVRDRKGKLLRNEFQSKDLPSTRIQPDRRWFGNTRVVNQKELEFFREELQNRMSSNYNVILKGKNLPMSLLNDHQKQSRVHLLDREPFEDAFGPKTKRKRPNLLAADYESLAKKADGSQEAFEEKYGASVSAEGNDDDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSREYPTLAFHASINKSFGKGSLLSVLRQFARLKSDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNKDSETDIVLKGVVRVTNLQDASEHIGEVLKRVKKEHLERAYKISQWDDETDFLVQLSKATGKLLKGGEPDLMTAAKMVLHDWQRGRIPFFVPPPRKDDLSEEEPNVNGVDVDTGVDSNQASAALKAIANVLSSQQQRSVPVQRDLFSEKELEEETADQLPSTQDNTDEEISTPNSDSAEQSPV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0691 550 MobiDBLite consensus disorder prediction 525 550 - -
Lele09g0691 550 MobiDBLite consensus disorder prediction 499 550 - -
Lele09g0691 550 PRINTS GTP1/OBG GTP-binding protein family signature 357 372 IPR006073 GO:0005525
Lele09g0691 550 PRINTS GTP1/OBG GTP-binding protein family signature 311 331 IPR006073 GO:0005525
Lele09g0691 550 Pfam NGP1NT (NUC091) domain 43 167 IPR012971 -
Lele09g0691 550 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 205 366 IPR030378 GO:0005525
Lele09g0691 550 Pfam 50S ribosome-binding GTPase 311 377 IPR006073 GO:0005525
Lele09g0691 550 MobiDBLite consensus disorder prediction 1 23 - -
Lele09g0691 550 MobiDBLite consensus disorder prediction 459 481 - -
Lele09g0691 550 CDD NGP_1 207 363 - -
Lele09g0691 550 Gene3D - 366 458 IPR023179 -
Lele09g0691 550 Gene3D - 195 365 IPR027417 -
Lele09g0691 550 MobiDBLite consensus disorder prediction 24 39 - -
Lele09g0691 550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 428 IPR027417 -
Lele09g0691 550 MobiDBLite consensus disorder prediction 1 39 - -
Lele09g0691 550 FunFam Nuclear/nucleolar GTPase 2 204 366 - -
Lele09g0691 550 FunFam Nucleolar GTP-binding protein 2 368 458 - -
Lele09g0691 550 PANTHER GTP-BINDING PROTEIN-RELATED 27 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0691 Lele-ChrLele09 5246890 5252540 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0691 09 5246890 5252540 Lele09g0691 09 5246890 5252540 ECH
Lele09g0691 09 5246890 5252540 Lele11g0701 11 6654298 6660057 hybridization
Lele09g0691 09 5246890 5252540 Lele12g0636 12 14724650 14728476 hybridization