Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0687 ATGCAATACAACCTCGCAATTACTCCCCTGCTCGTGTCTATGGTGACTGGGATGTTTGTCTTTCAGTATGATGATCTAGTTGAGTTGGAAATGTCTAATCAAGTCTTGTTTGAAAGTTTTATACACAGTGACTATGTAACTTGCATCCAATTTAATCCCGCTGATGATAGATACTTCATTAGCGAATCTTTGGATTCTAAGGTTCGCATATGGAGTATTCCTGATCGTCAAGTTGTTGATTGGACTGATTTGCATGAGATAGTCACTGCTGCTTGCTACACACCTGATGGTCAGGGTGCACTGGTAGGTTCATACAAGGGCAGCTGCCATGTGTATAATACATCTGGAAATAAATTGCAACAGAAGAGTGGGATTATGCTGCAGAACAAGAAAAATAAGTCAAATCTCAAGAAAATTACTGGCTTCCAGTTTGCTCCAGGAAGTTCATCAGAATTACTCATAACATCTGCCGATTCTCAAATTCGATTGGTTGATGGTGTTGACCTGGTTCATAAGTTCAAAGGCTTTCGTAACACAAATAGCCAAATTTTAGCCTCGTTCACAGCAAATGGAAAATATATAGTCTCAGCAAGTGAGAATTCCAATGTCTATATGTGGAAAAATGAAGCTAATTGCAGAACCAAAGGCGTCACCATCACTCAGTCATATGAACATTTTCATTGTAGAGATGTGTCAGTGGCTATTCCTTGGCCTGGGATGGGTGATGCATGGGAAATGCAAGATACTTTATCTGGAGAACAAACTGGGGCAGATAGTATCCCCGACGAGGTCTCGTCGGGGAATCATCCCCCAACCTCAGTAGATGAGGCATTAGTGGCCAACAATGGTTCACTTCGTGGAACTATAGCTAATGCTACAAACAGTTATTTTTTTGACAGAATTTCGGCAACATGGCCGGAGGAAAAACTTGTTCTTGCTGCTAGGAGACGAAGCCCTCGAGTTGGTGTGGATATCTCAGACGGGGTTAATCAAAACATGTCAGCCTGGGGCCTGGTGATGGTAACTGCTGGCCTCAGGGGGGAAATCCGAGCTTTTCAGAATTTTGGATTGCCACTGCGGATATAA 1086 0.4263 MQYNLAITPLLVSMVTGMFVFQYDDLVELEMSNQVLFESFIHSDYVTCIQFNPADDRYFISESLDSKVRIWSIPDRQVVDWTDLHEIVTAACYTPDGQGALVGSYKGSCHVYNTSGNKLQQKSGIMLQNKKNKSNLKKITGFQFAPGSSSELLITSADSQIRLVDGVDLVHKFKGFRNTNSQILASFTANGKYIVSASENSNVYMWKNEANCRTKGVTITQSYEHFHCRDVSVAIPWPGMGDAWEMQDTLSGEQTGADSIPDEVSSGNHPPTSVDEALVANNGSLRGTIANATNSYFFDRISATWPEEKLVLAARRRSPRVGVDISDGVNQNMSAWGLVMVTAGLRGEIRAFQNFGLPLRI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0687 361 SMART WD40_4 74 113 IPR001680 GO:0005515
Lele09g0687 361 SMART WD40_4 166 207 IPR001680 GO:0005515
Lele09g0687 361 SMART WD40_4 129 165 IPR001680 GO:0005515
Lele09g0687 361 SMART WD40_4 32 72 IPR001680 GO:0005515
Lele09g0687 361 PANTHER WD REPEAT DOMAIN 44 31 358 IPR040324 -
Lele09g0687 361 Gene3D - 26 232 IPR015943 GO:0005515
Lele09g0687 361 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 39 73 - -
Lele09g0687 361 ProSiteProfiles Trp-Asp (WD) repeats profile. 42 73 IPR001680 GO:0005515
Lele09g0687 361 SUPERFAMILY WD40 repeat-like 32 208 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0687 Lele-ChrLele09 5220769 5224807 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0687 09 5220769 5224807 Lele09g0687 09 5220769 5224807 ECH
Lele09g0687 09 5220769 5224807 Lele12g0640 12 14747637 14753173 hybridization