Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g2476 ATGAAGCATGCACTAGCATTTGTTGTTCTTTTGATTTCCTTTTCGCTGTTAAATTCCTTATCGTTTTCTTCAGTTCAGCCTTTCTCGGTGGATGGCACGGTGTTGCAATTGGATGAATCCAACTTAGATTCCGCCATATCGACGTTCGATCGTATCTTGGTTGACTTCTACGCTCCATGGTGTGGTCACTGCCAGCTTCTCTCCCCCGAGTTAGATGCAGCTGCACCTGTACTTGCAGCCTTAAAGGAACCCATAGTCATAGGAAAAGTGGATGCAGACAAGTTTACCGGTCTTGCAAAAAAATATGATGTTAATGCTTACCCTTCCCTTATGCTGTTTATACATGGTGTACCCACAGACTATCGTGGACCAAGGAAAGCAGATCTACTGGTTCATTATCTAAAGAAGTTTGCTGCTCCAGATGTTACCATTCTTGATTCAGATTCTGCTATTAATAACTTCATTGAAGCAGCCGGCACTTTATTCCCCATATTTATTGGTTTTGGTTTGAGTAGTTCCATGATAGAAAATTCAGCCATGAAGTATAAGAAAAATGCATGGTTTTCCGTGGCAAAGGATTTTTCAGAGGATGTCATGGGATCATATCATTTTGATAAGGTTCCTGCTTTGGTTTCCATTAATCAGGATTACAATGAGTGGGGCACTTTATATGGCCCCTTTGAAGAGAAGTTAGTGGAAGATTTTGTGAAACAAAACCTGATTCCTTTAGTGGCACCTGTATCCTTTGACACACTAAAGTTGATGGAAAGTGATGGGAGGAAAATTGTCTTGACAATTTTTGAGGATGAGGATGAAGAAAGATCAAAGAAATTCATTAAACTATTGAAGGCTGCTGCATCTACAAATCGTGACTTAATATTTGGTCATGTTGGTGTTGAACGGTTGGAACATTTTGCTGAAAAATTCGACCTCAACAAGTTACCAAAAATGGTTGTTTGGGATGGAAGTGATGATTACTTAACTGTTATTGGTTCAGAAAGCATTGATGAGGTCGATCAGGCAACTCAAATCAGTAAATTTCTTGAAGGATACAGGGAAGGCAGAAGCACACAGAAAAGACTCGGTGGCCCATCGCTCTTGCGTGCGATGAAAAAATCTCCTGCCATCAAAATCTTGTATGTCTTTGTTGCTGTGATTGTGGTATTGATGCTTCTTCTGATCTTTTGCAATAAAGGAGATGATGAGTACCAGAGAGTACTAAGTGAAGACCAAGTTTATCATTCTAGCAACTCTGCCTTAGAGGCTGAAACCAAAGAGTATTATAAACCTGAAGATAAAGAAGATTAA 1308 0.3976 MKHALAFVVLLISFSLLNSLSFSSVQPFSVDGTVLQLDESNLDSAISTFDRILVDFYAPWCGHCQLLSPELDAAAPVLAALKEPIVIGKVDADKFTGLAKKYDVNAYPSLMLFIHGVPTDYRGPRKADLLVHYLKKFAAPDVTILDSDSAINNFIEAAGTLFPIFIGFGLSSSMIENSAMKYKKNAWFSVAKDFSEDVMGSYHFDKVPALVSINQDYNEWGTLYGPFEEKLVEDFVKQNLIPLVAPVSFDTLKLMESDGRKIVLTIFEDEDEERSKKFIKLLKAAASTNRDLIFGHVGVERLEHFAEKFDLNKLPKMVVWDGSDDYLTVIGSESIDEVDQATQISKFLEGYREGRSTQKRLGGPSLLRAMKKSPAIKILYVFVAVIVVLMLLLIFCNKGDDEYQRVLSEDQVYHSSNSALEAETKEYYKPEDKED 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g2476 435 Gene3D Glutaredoxin 229 362 - -
Lele08g2476 435 SUPERFAMILY Thioredoxin-like 239 356 IPR036249 -
Lele08g2476 435 CDD PDI_a_family 35 134 - -
Lele08g2476 435 FunFam Protein disulfide-isomerase 5-2 23 138 - -
Lele08g2476 435 Pfam Thioredoxin-like domain 188 348 - -
Lele08g2476 435 PANTHER PROTEIN DISULFIDE ISOMERASE 7 358 - -
Lele08g2476 435 PRINTS Thioredoxin family signature 60 69 - -
Lele08g2476 435 PRINTS Thioredoxin family signature 52 60 - -
Lele08g2476 435 PRINTS Thioredoxin family signature 103 114 - -
Lele08g2476 435 SUPERFAMILY Thioredoxin-like 26 137 IPR036249 -
Lele08g2476 435 Pfam Thioredoxin 34 136 IPR013766 -
Lele08g2476 435 ProSiteProfiles Thioredoxin domain profile. 16 139 IPR013766 -
Lele08g2476 435 ProSitePatterns Thioredoxin family active site. 53 71 IPR017937 -
Lele08g2476 435 Gene3D Glutaredoxin 25 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g2476 Lele-ChrLele08 30448949 30452363 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g2476 08 30448949 30452363 Lele08g2476 08 30448949 30452363 ECH
Lele05g2558 05 41334671 41338833 Lele08g2476 08 30448949 30452363 hybridization