Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2558 ATGATGAAGCATGCACTAGCATTTGCGGTTCTTTTGATTTCCTTTTCGCTCTTCAATTCCTTATCGTTTTCTTCAGTTCAGCCTTTCTCGGTGGACGGCACGGTGTTGCAATTGGATGAATCCAACTTCGATTCCGCCATATCGACGTTCAATCGTATCTTGGTTGACTTCTACGCTCCATGGTGTGGTCACTGCCAACTTCTCTCCCCCGAGTTAGATGCAGCTGCACCTGTACTTGCAGCCTTAAAGGAACCCATAGTCATAGCAAAAGTGGATGCAGACAAGTATACCCGTCTTGCAAAAAAATACGATGTTTATGCTTATCCTTCCCTTATGCTGTTTATACATGGTGTACCCACAGACTATCGTGGACCAAGGAAAGCAGATCAACTAGTTCATTATCTAAAGAAGTTTGCTGCTCCAGATGTTACCATTCTTGATTCAGATTCTGCTATTAATAGCTTCATTGAAGCATCCGGCACTTTATTCCCCATATTTGTAGGTTTTGGGTTGAGTAGTTCTATGATAGAAAATTCAGCCATGAAGTATAAGAAAAATGCATGGTTTTCCGTGGCAAAGGATTTTTCAGAGGACGTCATGGGATCATATCATTTTGATAAGGTTCCTGCTTTGGTTTCCATTAATCAGGATTACAATGAGTGGAGCACTTTATATGGTCCCTTTGAAGAGAAGTTAGTGGAAGATTTTGTGAAACAAAACCTGATTCCTTTAGTGGCACCTGTATCCTTTGACACACTAAAGTTGATGGAAAGTGATGGGAGAAAAATTGTCTTGACAATTTTTGAGGATGAGTATGAAGAAAGATCAAAGAAATTCTTTAAACTATTGAAGGCTGCTGCATCTGCAAATCGTGACTTAATATTTGGTCATGTTGGTGTTAATCGTTTGGAAGATTTCGCTGAAAAATTCGACCTCAATAAGTTACCAAAAATGGTTGTTTGGGATGGAAGTGATGATTACCTAACTGTTATTGGTTCTGAAAGCATTGATGAGATGGATCAGGCTACTCAAATCAATAAATTTCTAGAAGGATACAGGGAAGGAAGAACCACACAGAAAAGACTCGGTGGCCCGTCGCTCTTGCGCGCAATGAAAAAATCTCCTGCCGTCAAAATCTTGTATGTCTTTGTTGCTGTGATTGTAATATTGATGGTTCTTCTGATATTTTGCTATAAAGAAGATGATGAGTATCAGAGGGTACAAAGTGAAGCCCAGGTTGATCATTATGCTAGCAACTCTGCCTTAGAGGCTGAAAGCAAAGAGTATTATAAACCCGAAGATAAAGAAGATTAA 1314 0.3965 MMKHALAFAVLLISFSLFNSLSFSSVQPFSVDGTVLQLDESNFDSAISTFNRILVDFYAPWCGHCQLLSPELDAAAPVLAALKEPIVIAKVDADKYTRLAKKYDVYAYPSLMLFIHGVPTDYRGPRKADQLVHYLKKFAAPDVTILDSDSAINSFIEASGTLFPIFVGFGLSSSMIENSAMKYKKNAWFSVAKDFSEDVMGSYHFDKVPALVSINQDYNEWSTLYGPFEEKLVEDFVKQNLIPLVAPVSFDTLKLMESDGRKIVLTIFEDEYEERSKKFFKLLKAAASANRDLIFGHVGVNRLEDFAEKFDLNKLPKMVVWDGSDDYLTVIGSESIDEMDQATQINKFLEGYREGRTTQKRLGGPSLLRAMKKSPAVKILYVFVAVIVILMVLLIFCYKEDDEYQRVQSEAQVDHYASNSALEAESKEYYKPEDKED 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2558 437 ProSiteProfiles Thioredoxin domain profile. 17 140 IPR013766 -
Lele05g2558 437 SUPERFAMILY Thioredoxin-like 27 138 IPR036249 -
Lele05g2558 437 Pfam Thioredoxin-like domain 189 349 - -
Lele05g2558 437 PANTHER PROTEIN DISULFIDE ISOMERASE 12 360 - -
Lele05g2558 437 CDD PDI_a_family 36 135 - -
Lele05g2558 437 SUPERFAMILY Thioredoxin-like 248 357 IPR036249 -
Lele05g2558 437 FunFam Protein disulfide-isomerase 5-2 24 139 - -
Lele05g2558 437 PRINTS Thioredoxin family signature 53 61 - -
Lele05g2558 437 PRINTS Thioredoxin family signature 104 115 - -
Lele05g2558 437 PRINTS Thioredoxin family signature 61 70 - -
Lele05g2558 437 Gene3D Glutaredoxin 230 363 - -
Lele05g2558 437 Pfam Thioredoxin 35 137 IPR013766 -
Lele05g2558 437 ProSitePatterns Thioredoxin family active site. 54 72 IPR017937 -
Lele05g2558 437 Gene3D Glutaredoxin 26 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2558 Lele-ChrLele05 41334671 41338833 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2558 05 41334671 41338833 Lele05g2558 05 41334671 41338833 ECH
Lele05g2558 05 41334671 41338833 Lele07g2574 07 31136548 31144165 hybridization
Lele05g2558 05 41334671 41338833 Lele08g2476 08 30448949 30452363 hybridization