Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1608 ATGGCTACAATAGCTGAACCTCTGTATCCCATAGCAGTTTTGATTGATGAGCTAAAGAACGATGATATCCACTTTAGGCTAAACTCGATCCGCAAACTTTCCACAATTGCACGTGTACTTGGGGAGGAAAGGACCAGGAAGGAATTGATTCCCTTTCTCAGTGAGAACAATGACGATGATGATGAGGTGCTTCTAGCAATGGCAGAGGAGTTGGGGGCTTTTGTCCCTTATGTTGGAGGTGTAGAACATGCCAATGTGCTACTACCTCCATTAGAAGCTCTCTGCTCGTTTGAGGAAACCTGCGTGAGGGATAAAGCAGTGGAGTCACTTTGTAGAATTGGAGCTCGAATGAGAGAAAAAGACTTGGTCGAGTACTTCATTCCCCTGGTTAAGAGACTGGCTGCTGGTGAGTGGTTCACAGCACGAGTTTCCTCATGTGGTTTGTTTCATCTGGCTTACCCTAGTGCACCAGAGGCCTTAAAAAGTGAGCTGAGAACTATGTATGGTCAGCTGTGTCAAGATGATATGCCAATGGTTAGAAGATCTGCTGCAATAAACCTGGGAAAATTTGCTGCCACTGTTGAAGTTACTCATTTGAAAACCAACATCATGCCCATATTTGAGGATCTCACACAAGATGAACAAGATTCTGTTCGGTTACTTGCTGTTGAAGGCTGTGCGGCTCTTGGGAAATTGTTGGATCCTCAAGATTCTGTGACAATTATTCTTCCTATCATGATTAATTTCTCCCAGGATAAGTCATGGCGTGTTCGTTACATGGTTGCTAATCAACTATATGAGCTCTGTGAAGCTGTTGGTCCTGAGCCTACCAAGTCAGACTTGCTTCCTGCATATGTTCTGCTACTGCGTGATCACGAGGCTGAAGTACGCATTGCTGCTGCTGGAAAAGTTACGAAGTTTTCTCGCATATTAAATCCAGAACTAGCTATCCAGCATATTCTACCATGTGTGAAAGATTTATCAACTGATTCATCTCAACATGTTCGCTCTGCACTGGCTTCAGTCATAATGGGGATGGCACCAGTTTTAGGGAAGGATGCAACAATTGAGCAGCTTCTGCCTATTTTCCTTTCACTTTTGAAAGATGAGTTTCCTGATGTCAGGCTGAACATTATCAGCAAGCTTGACCAAGTGAATCAGGTAATTGGCATTGACCTATTATCTCAGTCTCTATTACCAGCTATTGTTGAGCTTGCTGAGGATCGCCACTGGAGGGTTCGACTCGCAATCATAGAATATATACCTTTACTGGCAAGTCAGTTGGGTGTAGAATTTTTTGATGACAAGCTTGGAGCTCTTTGCATGCAATGGCTAAAGGACAAGGTCTACTCAATTCGTGATGCCGCTGCTATTAATGTAAAACGCTTAGCAGAAGAATTCGGACCAGGTTGGGCAATGCAGCATATTATTCCTCAGGTTTTGGACATGATAAACGATTCAAACTATCTTTATCGAATGACCGTTCTTCATGCAATCTCTCTTTTAGCTCCTGGTCTGGGTTCAGAGATTACTTCTTCAAAACTGCTCCCTCTAGTAATAAAAGCATCAAAAGATGGGGTACCCAACATCAAATTCAACGTAGCTAAAGTTCTTCAGTCTATCATTCCGGTTGTAGATCAGTCTGTGGTTGAGAATACTATCCGTCCCTGTTTGGCTGAACTCAGTGAGGATCCTGATGTTGATGTTCGTTTTTTTGCCACCCGAGCACTACAATCTAAGTCCAGCTAG 1749 0.4334 MATIAEPLYPIAVLIDELKNDDIHFRLNSIRKLSTIARVLGEERTRKELIPFLSENNDDDDEVLLAMAEELGAFVPYVGGVEHANVLLPPLEALCSFEETCVRDKAVESLCRIGARMREKDLVEYFIPLVKRLAAGEWFTARVSSCGLFHLAYPSAPEALKSELRTMYGQLCQDDMPMVRRSAAINLGKFAATVEVTHLKTNIMPIFEDLTQDEQDSVRLLAVEGCAALGKLLDPQDSVTIILPIMINFSQDKSWRVRYMVANQLYELCEAVGPEPTKSDLLPAYVLLLRDHEAEVRIAAAGKVTKFSRILNPELAIQHILPCVKDLSTDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVEFFDDKLGALCMQWLKDKVYSIRDAAAINVKRLAEEFGPGWAMQHIIPQVLDMINDSNYLYRMTVLHAISLLAPGLGSEITSSKLLPLVIKASKDGVPNIKFNVAKVLQSIIPVVDQSVVENTIRPCLAELSEDPDVDVRFFATRALQSKSS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1608 582 Pfam HEAT repeats 361 460 - -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 281 319 IPR021133 -
Lele08g1608 582 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 5 579 - -
Lele08g1608 582 Gene3D - 3 579 IPR011989 -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 320 358 IPR021133 -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 398 436 IPR021133 -
Lele08g1608 582 SUPERFAMILY ARM repeat 9 578 IPR016024 -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 359 397 IPR021133 -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 554 582 IPR021133 -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 515 553 IPR021133 -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 476 514 IPR021133 -
Lele08g1608 582 Pfam HEAT repeat 242 270 IPR000357 GO:0005515
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 242 280 IPR021133 -
Lele08g1608 582 ProSiteProfiles HEAT repeat profile. 203 240 IPR021133 -
Lele08g1608 582 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 2 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1608 Lele-ChrLele08 10698069 10704177 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1608 08 10698069 10704177 Lele08g1608 08 10698069 10704177 ECH
Lele06g1616 06 10804369 10812059 Lele08g1608 08 10698069 10704177 hybridization