Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1394 ATGCAGCAGCATCACTGTGTGATCATCGTCGGAGCAGGTCCTTCTGGCCTCTCTGTGGCAGCATGCTTAACACGACGATCCATTCCCTTCATAATCCTCGAAAGAGACGACTGTTTTGCATCTTTATGGACCAAACATTCCTACGATCGCCTTCGCCTTCACCTCATAAAGCAATTCTGTGAGCTTCCTCACGTGTCGTTCCCACAGTCTTATCCTCAGTACGTACCAAAGGAGCAGTTCTTGCAGTACCTACATGACTACGTGTCGCACTTCAGAATCAGTCCTCTCTACCGTAGAACCGTGGAGAGAGCGGAGTACGATGAGGGTGGCCAGAAATGGAGGGTGAAAGCCAGGAATGGGGATTCCAGCGAGGTGGAGGAATATTCCGGGAGGTTCCTGGTGGTGGCCACCGGAGAGAACAGCGAGCCTTTCGTGCCGGAGGTGGAGGGGCTACGTGGGTTTAAAGGGAGAGTGATTCACTCAACTGGATTCAAGTCAGGGAAGGAGTTCAAAGGTGAGCATGTTCTGGTGGTTGGATCTGGCAATTCTGGCATGGAAATCACATTGGACCTAGCCAACCACGGAGCCAAGACCTCCATCTTGATCCGAAGCGCGGTGCATTTGCTGTCAAGGAAGATGGCGAATCTGGGACTGATGCTGTTGAAATATTTGCCTGTGAACATAGTGGACTCAGTGTTGGTGATTCTGAGCAAAATGGTTTATGGGGATACTTCTAAATTTGGGATCAAGAGGCCTCACGAAGGTCCTTTCTACATGAAGGCCAAGTATGGTAAGTATCCAGTCTTTGACGTTGGAACCTTCCAGAAGATCAAATATGGGCAGATACAGGTGATTGAAGAAGAAATAGAAAGTGTGGAGGGGAACGACGTTGTGTTTAAGAATGGCAGGTCGCTACCATTTGACTCTATTGTTTTCTGCACTGGCTTCAAAAGATCAACGAACAAGTGGCTAAAGGGGGATGATTATCTCTTAAATGATGATGGCATTCCCAAGCTTAATTACCCAAACCATTGGAAGGGAAAGAATGGCTTGTATTGCGTTGGACTATCAAGAAGAGGTTTTTATGGAGCTTCCGCAGATGCCGAAAATATAGCCACCCATATTAGCTCGATTGTATCATAG 1143 0.4777 MQQHHCVIIVGAGPSGLSVAACLTRRSIPFIILERDDCFASLWTKHSYDRLRLHLIKQFCELPHVSFPQSYPQYVPKEQFLQYLHDYVSHFRISPLYRRTVERAEYDEGGQKWRVKARNGDSSEVEEYSGRFLVVATGENSEPFVPEVEGLRGFKGRVIHSTGFKSGKEFKGEHVLVVGSGNSGMEITLDLANHGAKTSILIRSAVHLLSRKMANLGLMLLKYLPVNIVDSVLVILSKMVYGDTSKFGIKRPHEGPFYMKAKYGKYPVFDVGTFQKIKYGQIQVIEEEIESVEGNDVVFKNGRSLPFDSIVFCTGFKRSTNKWLKGDDYLLNDDGIPKLNYPNHWKGKNGLYCVGLSRRGFYGASADAENIATHISSIVS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1394 380 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Lele08g1394 380 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Lele08g1394 380 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 205 - -
Lele08g1394 380 Gene3D - 1 380 IPR036188 -
Lele08g1394 380 SUPERFAMILY FAD/NAD(P)-binding domain 6 274 IPR036188 -
Lele08g1394 380 SUPERFAMILY FAD/NAD(P)-binding domain 173 375 IPR036188 -
Lele08g1394 380 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 7 377 - -
Lele08g1394 380 PIRSF FMO 3 359 IPR000960 GO:0050660|GO:0050661
Lele08g1394 380 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Lele08g1394 380 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1394 Lele-ChrLele08 8932893 8934371 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1394 08 8932893 8934371 Lele08g1394 08 8932893 8934371 ECH
Lele05g1549 05 9933896 9934738 Lele08g1394 08 8932893 8934371 hybridization
Lele06g1396 06 8988850 8990330 Lele08g1394 08 8932893 8934371 hybridization