Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1396 ATGCAGCAGCATCACCGTGTGATCATCGTCGGGGCAGGTCCTTCTGGCCTCTCTGTGGCGGCATGCTTAACACGACGATCCATTCCCTTCATAATCCTCGAAAGAGAAGACTGTTTTGCTTCTTTATGGACCAAATATTCCTACGATCGCCTTCGCCTTCACCTCATAAAGCAATTCTGTGAGCTTCCTCACATGTCGTTCCCAAAGTCTTATCCTCAGTACGTACCAAAGGATCAGTTCTTGCAGTACCTACATGACTACGTGTCGCACTTCAGAATCAGTCCTCTCTACCGTAGAACCGTGGAGAGAGCGGAGTACGATGAGGGTGGCCAGAAATGGAGGGTGAAAGCCAGGAATGGGGATTCCGGCGAGGTGGAGGAATATTCCGGGAGGTTCCTGGTGGTGGCCACCGGAGAGAACAGCGAGCCTTTCGTGCCCGAGGTGGAGGGGCTACGTGGGTTTAAAGGGAGAGTGATTCACTCAACTGGATTCAAGTCGGGGAAGGAGTTCAAAGATGAGCATGTTCTGGTGGTTGGATCTGGCAATTCTGGCATGGAAATCACATTGGACCTAGCCAACCATGGAGCCAAGACCTCCATCCTGATCCGAAGCGCGGTGCATTTGCTGTCAAGGAAGACGGCGAATCTGGGACTGATGCTGTTGAAATATTTGCCTGTGAACATAGTGGACTCACTGTTGGTGATTCTGAGCAAAATGGTTTATGGGGATACTTCTAAATTTGGGATGAAGAGGCCTCATGAAGGTCCTTTCTACATGAAGGCAAAGTATGGTAAGTATCCAGTCTTTGACGTTGGAACCTTCCAGAAGATCAAATCTGGGCAGATACAGGTGATTGAAGAAGTAATAGAAAGTGTGGAGGGGAACAACGTCGTGTTTAAGAATGGCAGGTCGCTACCATTTGACTCTATTGTTTTCTGTACTGGCTTCAAAAGATCAACGAACAAGTGGCTAAAGGGGGATGATTATCTCTTAAATGATAATGGCATTCCCAAGCTTGATTACCCAAACCATTGGAAAGGAAAGAAGGGCTTGTACTGCGTTGGGCTATCAAGAAGAGGCTTTTATGGAGCTTCCGCAGATGCCGAAAATATAGCCACCCACATTAGCTCGATTGTATCATAG 1143 0.4794 MQQHHRVIIVGAGPSGLSVAACLTRRSIPFIILEREDCFASLWTKYSYDRLRLHLIKQFCELPHMSFPKSYPQYVPKDQFLQYLHDYVSHFRISPLYRRTVERAEYDEGGQKWRVKARNGDSGEVEEYSGRFLVVATGENSEPFVPEVEGLRGFKGRVIHSTGFKSGKEFKDEHVLVVGSGNSGMEITLDLANHGAKTSILIRSAVHLLSRKTANLGLMLLKYLPVNIVDSLLVILSKMVYGDTSKFGMKRPHEGPFYMKAKYGKYPVFDVGTFQKIKSGQIQVIEEVIESVEGNNVVFKNGRSLPFDSIVFCTGFKRSTNKWLKGDDYLLNDNGIPKLDYPNHWKGKKGLYCVGLSRRGFYGASADAENIATHISSIVS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1396 380 SUPERFAMILY FAD/NAD(P)-binding domain 1 280 IPR036188 -
Lele06g1396 380 PIRSF FMO 3 358 IPR000960 GO:0050660|GO:0050661
Lele06g1396 380 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 205 - -
Lele06g1396 380 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lele06g1396 380 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 5 377 - -
Lele06g1396 380 Gene3D - 1 380 IPR036188 -
Lele06g1396 380 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Lele06g1396 380 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
Lele06g1396 380 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Lele06g1396 380 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1396 Lele-ChrLele06 8988850 8990330 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1396 06 8988850 8990330 Lele06g1396 06 8988850 8990330 ECH
Lele06g1396 06 8988850 8990330 Lele08g1394 08 8932893 8934371 hybridization