Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1260 ATGATCGAATCTCTTCCGCCACCGCCTTCACCATCTCAACCCATTCCACCACCGGCGACCGATCGAAGTGTCACCTTGATTCCCGGCCTCCCCATCGACGTCGCTGCCCTCATCCTCTCTTTCATCCCCTACTCTCACCATGCTCGCCTCAAGCCCACCTGCAAATCATGGAACCTCTTCCTTTCCTCCAGAACTTTCATCTCTCTCCGCCGTCACCACCGTCACCTCTCTCACCTCCTCTGTATCTTCCCTCAGGACCCCTCCATAGCCTCCCCTTTCCTCTTTGACCCCTCCTCCCTCGCTTGGTGCCCTCTCCCTCTTATGCCCTGTAACCCCCATGTCTATGGCCTCTGTAACTTCTCCTCTATTTCCATCGGCCCTTACCTCTATGTGCTCGGAGGCTCCCTTTTCGACACCCGATCGTTTCCGATTGATCGCCCCTCCCCGACTTCCTCCACTTTTCGTTTCAGTTTCTATGATTTCTCCTGGGAACGCCTTGCCCCCATGCTCTCACCACGTGGCAGCTTCGCCTGTGCCGCCGTCCCTGATTCTCAACAGATTCTGGTGGCAGGTGGTGGGTCAAGGCATACGATGTTCGCGGCCGCCGGAAGCCGAATACGTTCTGTGGAGAGGTACGATATTGGGAAGGATGAGTGGGTTGCCATGGATGGATTGCCGAACCACCGAGCGGGATGCGTTGGATTTTTGGTTAGGAATCGGAAAGGGAGCAGCAGGGAGTTCTGGGTGATGGGTGGGTATGGTGCTTCAAGAACCATTTCGAGGGTTTTCCCTGTGGATGAGTATTATAGGGACGCGGTGGTGATGGAATTGAAGAATGGGTTTGATGATGGGAAGTGGAGGGAGGCTGGGGACATGTGGGGAGAAGGACAGCGGATGAGGCTTGGAAGGATTGTTGTTGTCGAGGACGAGAATCAAGACTGCCCCGGCATTTTCATGCTCGATGGGAATGAGATTCTGAGATATGACATGTCTTCGAATCGCTGGCTATATGAGTCTCGTGTACCAAGAAAAGCTCCACATAACTCATCATTTGGTTTTGTAGTATTAGACGGGGAGCTGTATGTGATGACGCATTCAAGTGTGGTTGATATGACTGAAACAAGAAGGAGGACCAGACACCACAAGAGGACAGGCACTCTGTTCATACAAATCTATAACCCGAAGAAGAAGACGTGGAGAACTCGAGTCAGCAAGTTGCCCTTCAATTACCCCATTGATATTAATACTACAGTACTGAGCTCGATTTGTCTGTAA 1275 0.5224 MIESLPPPPSPSQPIPPPATDRSVTLIPGLPIDVAALILSFIPYSHHARLKPTCKSWNLFLSSRTFISLRRHHRHLSHLLCIFPQDPSIASPFLFDPSSLAWCPLPLMPCNPHVYGLCNFSSISIGPYLYVLGGSLFDTRSFPIDRPSPTSSTFRFSFYDFSWERLAPMLSPRGSFACAAVPDSQQILVAGGGSRHTMFAAAGSRIRSVERYDIGKDEWVAMDGLPNHRAGCVGFLVRNRKGSSREFWVMGGYGASRTISRVFPVDEYYRDAVVMELKNGFDDGKWREAGDMWGEGQRMRLGRIVVVEDENQDCPGIFMLDGNEILRYDMSSNRWLYESRVPRKAPHNSSFGFVVLDGELYVMTHSSVVDMTETRRRTRHHKRTGTLFIQIYNPKKKTWRTRVSKLPFNYPIDINTTVLSSICL 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1260 424 SUPERFAMILY F-box domain 24 111 IPR036047 GO:0005515
Lele08g1260 424 SMART kelc_smart 186 239 IPR006652 GO:0005515
Lele08g1260 424 SMART kelc_smart 128 183 IPR006652 GO:0005515
Lele08g1260 424 Pfam Kelch motif 117 169 IPR006652 GO:0005515
Lele08g1260 424 Pfam Kelch motif 178 222 IPR006652 GO:0005515
Lele08g1260 424 Gene3D - 70 410 IPR015915 GO:0005515
Lele08g1260 424 SUPERFAMILY Kelch motif 84 402 IPR015915 GO:0005515
Lele08g1260 424 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 18 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1260 Lele-ChrLele08 8021812 8024952 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1260 08 8021812 8024952 Lele08g1260 08 8021812 8024952 ECH
Lele05g1409 05 8904940 8907587 Lele08g1260 08 8021812 8024952 hybridization
Lele06g1267 06 8077077 8081266 Lele08g1260 08 8021812 8024952 hybridization