Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1267 ATGTGCTATCTGGGACTGGCGAAAGAAACGCCTTTCCCATTTCCTCGCACCACACTAGCCATTTTGCCATTCTCAGTTTGCAGCGTGGTTAGTCTTCTGTCTTGGGGAGCAAGTCAGAAGGCCGAGGTCGAGTCCCAAATGATCGAATCTCTTCCGTCACCGCCTTCACCATCTCAACCCATTCCACCACCGGCGACCGATCGAAGTGTCACCTTGATTCCCGGCCTCCCCATCGACGTCGCTGCCCTCATCCTCTCTTTCATCCCCTACTCTCACCATGCTCGCCTCAAGCCCACCTGCAAATCATGGAACCTCTTCCTTTCCTCCAGAACTTTCATCTCTGTCCGCCGTCACCATCGTCACCTCACTCACCTCCTCTGTATCTTCCCTCAGGACCCCTCCATAGCCTCCCCTTTCCTCTTCGACCCCTCCTCCCTCGCTTGGTGCCCTCTCCCTCTTATGCCCTGTAACCCCCATGTCTATGGCCTCTGTAACTTCTCCTCTATTTCCATCGGCCCTTACCTCTATGTGCTCGGAGGCTCCCTTTTCGACACCCGATCGTTTCCGATTGATCGCCCCTCCCCGACTTCCTCCAGTTTTCGTTTCAATTTCTATGATTTCTCCTGGGAACGCCTTGCACCCATGCTCTCACCACGTGGCAGCTTCGCCTGTGCCGCCGTCCCTGATTCTCAACAGATTCTGGTGGCAGGTGGTGGGTCAAGGCATACGATGTTCGCAGCTGCCGGAAGCCGAATACGTTCTGTGGAGCGGTACGATATTGAGAAGGATGAGTGGGTTGCCATGGATGGATTGCCGAACCACCGAGCGGGATGCGTTGGATTCTTGGTTAGGAATCGGAAAGGGAACAGCAGGGAGTTCTGGGTGATGGGTGGGTATGGTGCTTCAAGAACCATTTCGGGGGTTTTACCTGTGGATGAGTATTATAGGGACGCGGTGGTGATGGAATTGAAGAAGGGGTTTGATGATGGGAAGTGGAGGGAGGCTGGGGACATGTGGGGAGAAGGACAGAGGATGAGGCTTGGAAAGATTGTTGTTGTCGAGGACGAGAATCAAGACTGTCCCGTCATTTTCATGCTCGATGGGAATGAGATTCTGAGATATGACATGACTTCGAATCGCTGGCTATACGAGTCTCGTGTACCAAGAAAAGCTTCACATAACTCATCATTTGGTTTTGTAGTCTTAGACGGGGAGCTGTATGTGATGACGCATTCAAGTGTGGTTGATATGACTGAAACAAGAAGGAGGACCAGACACCACAAGAGGACAGGCACACTGTTCATACAAATCTATAACCCGAAGAAGAAGACGTGGAGAACTCGAGTCAGCAAGTTGCCCTTCAATTACCCCATTGATATTAATACTACAGTACTGGGCTCGATTTGTCTGTAA 1413 0.518 MCYLGLAKETPFPFPRTTLAILPFSVCSVVSLLSWGASQKAEVESQMIESLPSPPSPSQPIPPPATDRSVTLIPGLPIDVAALILSFIPYSHHARLKPTCKSWNLFLSSRTFISVRRHHRHLTHLLCIFPQDPSIASPFLFDPSSLAWCPLPLMPCNPHVYGLCNFSSISIGPYLYVLGGSLFDTRSFPIDRPSPTSSSFRFNFYDFSWERLAPMLSPRGSFACAAVPDSQQILVAGGGSRHTMFAAAGSRIRSVERYDIEKDEWVAMDGLPNHRAGCVGFLVRNRKGNSREFWVMGGYGASRTISGVLPVDEYYRDAVVMELKKGFDDGKWREAGDMWGEGQRMRLGKIVVVEDENQDCPVIFMLDGNEILRYDMTSNRWLYESRVPRKASHNSSFGFVVLDGELYVMTHSSVVDMTETRRRTRHHKRTGTLFIQIYNPKKKTWRTRVSKLPFNYPIDINTTVLGSICL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1267 470 Gene3D - 113 456 IPR015915 GO:0005515
Lele06g1267 470 SUPERFAMILY Kelch motif 130 448 IPR015915 GO:0005515
Lele06g1267 470 Pfam Kelch motif 224 268 IPR006652 GO:0005515
Lele06g1267 470 Pfam Kelch motif 163 215 IPR006652 GO:0005515
Lele06g1267 470 SMART kelc_smart 232 285 IPR006652 GO:0005515
Lele06g1267 470 SMART kelc_smart 174 229 IPR006652 GO:0005515
Lele06g1267 470 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 63 470 - -
Lele06g1267 470 SUPERFAMILY F-box domain 70 158 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1267 Lele-ChrLele06 8077077 8081266 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1267 06 8077077 8081266 Lele06g1267 06 8077077 8081266 ECH
Lele06g1267 06 8077077 8081266 Lele07g1469 07 8966091 8969161 hybridization
Lele06g1267 06 8077077 8081266 Lele08g1260 08 8021812 8024952 hybridization