Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1158 ATGTCAAGAGCAACAACAATAGATGACGTGAGAGCTGAGTTGTGGAGAGCTCGGCTCGGCTCGGCTCTACGAACCACCTTGGCATGCACCATAGTAGGTTGCACCGCCCTGCACGGCCCAGCGCAGCTCCGGCAATACATCAAGTTCCCGGCTTTCTCTTATGTGACAACAATCCTCGTAGTGTCGGACGCAAACCTGGGTGACACCATCAGAGGTTGCTGGCATGTGTTCTGTGCGACTCTTCAGGTAATGATCCTGTCCATTGTTGGGCTGCAGGTGGTGGGACCTGACCACTTCACGAGCCAAGTGGCGGCGATCGCGGTGGCAGTGAGCGCATTCATGGTGGCGGTGCCGGAGACGACGCACTTGTTGACTAAGAGAATCGCATTTGGGCAGCTAGTGATTGTGTACGTGAGCACAGTGATACATGGGGCAGAAGGTGGAGGAGTTTTAAAGCATCCAATTCAAGTGGCTTCTAGTACTGCCCTTGGAGCTTTGGCTTCTGTCGTGGCCATGTTGATTCCATATCCTCGACTTTCTCATTTTCAGGTAAAAAAGGCAATCAGATTATTCGCTGAGAATGCTTCCGAGAGGTTTAATCACAATCTAGAGGCTATCTCTGCATCAGACAACTCAACTGGTCATGACTTGTGCACTCAATCAAAGTCCCTGGCTAATGCAGGAGCCAAGCTTCTCCATTGGATTAAGAGTAATCTGGATGGTATGCGTTGGGAAAGGCCTCGAATGAGAGCCTTTTTTGACAAACTACAAGACAAGGAGATACCATTACGAGGAATGGACATTGCTCTCTCGAGCTGCACTTCGTTTCCTCTTGGCTCCGTTGATGAGGAGCTCAGGGGTGTTTTGCTCGATCACAGAGGACGATTCAGCCTCAAATTCAGTAAACAAGTTTCGTGCGTTGCTTCTTTTGATGCAACCACGGCCCCAGAAAGCAAGAACAGAGAAAACTTCAATAGTTTCCCATCATCCGTAGCACATAAACACCTCCCAACTTCATTCTTTCTGTACTGTGTTCAACTCCTCCTAGGGGACACCCCTATCGCAACGAACACCAACAACATGGAAGAGAAAACCCAGAAAACTGACGCCGACCAGCATGGAATCCTAAAGAGGATCAAAGAGTTTATTATTAACATGCTTCCCAGTAGACAGAATCTGGCATTTGCATTCAAGTGCTCAGTTTCTTTGGGACTTGCTGTGTTCTTTGGTTTGACATATGACAGAGAGCATGCATTATGGTCGGGACTAACAATTGCCATAAGTTTTGTCACGAGAAGACAGCCAACATTCTCAGTCGCTAATGCTCGAGGACAAGGAACGGCAATGGGATCGATCTACGGCGTCATTTGTAGCTTTCTGTTCCATAGATTTGGCGGCTTCAGCTTCTTGCCTCTACTGCCATGGGTCGTTTTCTGTTGCTTTTTAATGCACAGTAAACTGTACGGCCAAGCTGGTGGGATCTCAGCAGTCATAGGCGCCCTTCTAATTCTTGGAAGAAAGAATTACGGCCCTCCTGCAGAGTTTGCAATTGCTCGAATCGCCGAGGCTACGATCGGACTCACTTGTTTCATCCTCGTAGAGATCGTTCTTAACCCTTCGAGGGGGGCAAGTCTCGCAAAATCTCAACTTTCCCACGGCTTGAAGGCACTTCAAGATTGCATTGAGATTATTGCTATTGCCTCTAGCGATAAGCAAAAGACATGTCGGAACAACCCTCAAGAATTGCGAAAGAGACAAGAGAATCTCAAGTCTACTGCGTGTCAATTACAAGTGTTCATAGAGGAGGCCGAGATGGAGCCAAATTTCTGGTTCCTGCCTTTTCATGGTGCTTGCTATAGGAAGATTTTGGATTCCTTATCAACGATGACAGATCTCTTACTCTTTGTGGCACACTCAATAGAAAATGTCTCAAGATTGTCACTGAACGAAGGGGTAACGTCGGTGCAACTACAAGATAGAGTAAATGAGGACATAGAGCTTTTCAAGGCCAAAGTTGGCCCCACTCTGAAATGCCTTGAGGAGATAACCAAGATTAAGTCTCTCAGGAAACTTGAACAGAAGTGGAAGAAAAGAAATCGAAGTAGAGACATTGAATTAGGTGAACATCCCAAAGCAGAGACAATTAGGGTCCAGCGTGGTCAAGAAGAGGCTGAAAGCATTGCTTGCTCTTTCCTGCAACATTTGGAAGAGATGGCTGATGAAGTTCATTCTAACTCATCCAGTGAGGAGGCTGCTATGGACGAAATAATTGCTCATTACAGTTGCTTGGGATTCTGCATCAGTGGCTTGATCAAAGAAACAATAAAGATTGAGAATGAAGTAAAAGAACTAGTGATGTGGGAGAATCCCTCGAATGATTCAAGCCTCACTGAAATTTATTGTAAGATCGATGCTCTACGTTCGCAATAG 2430 0.465 MSRATTIDDVRAELWRARLGSALRTTLACTIVGCTALHGPAQLRQYIKFPAFSYVTTILVVSDANLGDTIRGCWHVFCATLQVMILSIVGLQVVGPDHFTSQVAAIAVAVSAFMVAVPETTHLLTKRIAFGQLVIVYVSTVIHGAEGGGVLKHPIQVASSTALGALASVVAMLIPYPRLSHFQVKKAIRLFAENASERFNHNLEAISASDNSTGHDLCTQSKSLANAGAKLLHWIKSNLDGMRWERPRMRAFFDKLQDKEIPLRGMDIALSSCTSFPLGSVDEELRGVLLDHRGRFSLKFSKQVSCVASFDATTAPESKNRENFNSFPSSVAHKHLPTSFFLYCVQLLLGDTPIATNTNNMEEKTQKTDADQHGILKRIKEFIINMLPSRQNLAFAFKCSVSLGLAVFFGLTYDREHALWSGLTIAISFVTRRQPTFSVANARGQGTAMGSIYGVICSFLFHRFGGFSFLPLLPWVVFCCFLMHSKLYGQAGGISAVIGALLILGRKNYGPPAEFAIARIAEATIGLTCFILVEIVLNPSRGASLAKSQLSHGLKALQDCIEIIAIASSDKQKTCRNNPQELRKRQENLKSTACQLQVFIEEAEMEPNFWFLPFHGACYRKILDSLSTMTDLLLFVAHSIENVSRLSLNEGVTSVQLQDRVNEDIELFKAKVGPTLKCLEEITKIKSLRKLEQKWKKRNRSRDIELGEHPKAETIRVQRGQEEAESIACSFLQHLEEMADEVHSNSSSEEAAMDEIIAHYSCLGFCISGLIKETIKIENEVKELVMWENPSNDSSLTEIYCKIDALRSQ 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1158 809 Pfam Fusaric acid resistance protein-like 405 533 - -
Lele08g1158 809 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 12 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1158 Lele-ChrLele08 7243519 7247221 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1158 08 7243519 7247221 Lele08g1158 08 7243519 7247221 ECH
Lele05g1305 05 8121500 8124519 Lele08g1158 08 7243519 7247221 hybridization
Lele06g1166 06 7254720 7258424 Lele08g1158 08 7243519 7247221 hybridization