Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1305 ATGTCAAGAGCAACAACAATACGTGATACCAGAGCTGAGTTGTGGAGAGCTCGGCTCGGCTGGGCTATACGAACCACCTTGGCATGCACCATAGTAGGTTGCACCGCCCTGCACGGCCCGGAGCAGCTCCGGCAATACATCAAGTTCCCGGCTTTCTCTTACGTGACAACAATCCTCGTAGTGTCGGATGCAAACCTGGGTGACACCATCAGAGGTTGCTGGCACGTGTTTTGTGCTTCCCTTCAGGTGATGATCCTGTCCATAGTTGGGTTGCAGGTGGTGGGACCTGCCCACTTCACGAGCCAAGTGGCGGCGACCGCGGTGGCAGCTAGAGCATTCATGGTGGCGGTGCCGGAGACGACGCACTTGTTGACTAAGAGAATAGCATTTGGGCAGCTAGTGATTGTGTACGTGGGCACAGTGATATTTGGGGCAGAAGGTGGAGGGGTTTTAAAGCATCCAATTCAGGTGGCTTCAAGTACTGCCCTCGGAGCTTTGGCTTCTGTCTTGGCCATGTTGTTTCCATATCCTCGACTTTCTCATTTTCAGGTAAAAAAGGCAATCGGATTATACGCTGAGAATGCTTCTGAGAGGTTTAATCACAATCTAGAGGCTGTCTCTGCATCAGACAACTCAACTGGTCATGATTTGTGCACTCAATCAAAGTCCCTGGCTAATGCAGGAGCCAAGCTTCTCCATTGGATTAAGAGTAATCTAGATGGCATGCGTTGGGAAAGGCCTCGAATGAGAGCCTTTTTTGACAAACTACAAGACAAGGAGATATCATTACGAGGAATGGAAATTGCCCTCTCGAGCTGCACTTCATTTCCTGTCGGCTCCATTGATGAGGAGCTGAGGAGTGTTTTGCTCGATTACAGAGGACGATTCAGCTTCAAATTCAGTAAACAAGCTTCGTGCGTTGTTTCTTTCGATGCAAGCACAGCCCCAGAAAGCAAGAACAAAGACAACTTCAACAGTTTCCCATGGTCTCTCAAGAACTTATCCGTAGCACATAAACCCCTCCCAACTTTATTCTTTCTGTACTGTGTCCAACTCCTCCTAGAGGAGACCCCTATCGCAACGAACACCAACAACATGGAAGAGAGAACCCAGAAAACTGACGCCCACGAGCATGGAATCCTCAAGAGGATCAAAGAGGTTATTATTAACATGCTACCGAGTAGACAGAATCTGGCTTTTGCATTCAAGTGCTCGGTTTCTTTGGGACTTGCTGTGTTCTTTGGTTTGACATATGACAGAGAGCATGCATTGTGGTCGGGACTTACAATTGCCATAAGTTTTGCCACGAGAAGACAGCCAAAATTCTCAGTCGCTAATGCTCGAGGACAAGGAACGGCAATGGGATCGATCTACGGCGTCATTTGTAGCTTTCTGTTCCATAGATTTGGCGGCTTCAGCTTCTTGCCTCTTCTGCCATGGGTGGTTTTCTGTTGTTTTTTAATGCACAGTAAAATGTACGGCCAAGCTGGTGGGATCTCAGCAGTTATAGGAGCCCTCCTAATTCTTGGAAGGAAGAATTATGGCCCTCCTGCAGAGTTTGCAATAGCTCGAATCGCTGAGGCGACGATCGGACTCACTTGTTTCATAGTCGTTGAGATTATTCTTAACCCTTCGAGAGGGAAAAGTCTCGCAAAATCTCAACTTTCCCATAGCTTGAAGGCATTTAGAGATTGCATTGAGACCATTGCTATTGCTTCCAGCGATAAGCAAAAGACATGTTGGAACAACTCTCAAGAATTACGAAAGAGACAAGAGAATCTCAAGTCTATCGTATGTCAATTACAAGAGTTCATAGAGGAGGCCGAATTGGAGCCAAATTTCTGGTTCCTGCCTTTTCGTGGTGCTTGCTATAGGAAGATTCTGGATTCCTTATCAACGATAACGGATCTCTTACTTTTCGTGGCACACTCAATAGAAAATGTCTCAAGATTGTCACAAAGAGAAGGAGAAACGGCGGTTCAACTACAAGATAGAGTAAACGAGGACATAGAGCTTTTCAAGGCCAAAGTTGGCCCCACTCTGAAATGCCTTGAGGAGATAACCCAGATTAAGTCTCTCAGGAAACTTGAAAGAAAGTGGAAGAAAAGAAATCCAAGTAGAGACATCGAATTAGGTGAACATCCCGACGCAGATACAATTAGGGTCATGCGTGGTCATGAAGAGGCTGAAAGCATTGCTTGCTCTTTCCTGCAACATTTAGAGGAGATGGCTGATGCACTTCATTCTAACTCATCCAATGAGGAGGCAGTTATAGGCCAACTAATTGCTCACTACAGTTGCTTGGGATTCTGCATCAGTGGCTTAATCAGAGAAACAATAAAGATTGAGAACGAAATAAAAGAACTAGTGATGTGGGAGAATCCCTCGAGTGATTCAAGCCTCACAGAAATTTATTATAAGATCAATGCTCTACGTTCGTAA 2442 0.4595 MSRATTIRDTRAELWRARLGWAIRTTLACTIVGCTALHGPEQLRQYIKFPAFSYVTTILVVSDANLGDTIRGCWHVFCASLQVMILSIVGLQVVGPAHFTSQVAATAVAARAFMVAVPETTHLLTKRIAFGQLVIVYVGTVIFGAEGGGVLKHPIQVASSTALGALASVLAMLFPYPRLSHFQVKKAIGLYAENASERFNHNLEAVSASDNSTGHDLCTQSKSLANAGAKLLHWIKSNLDGMRWERPRMRAFFDKLQDKEISLRGMEIALSSCTSFPVGSIDEELRSVLLDYRGRFSFKFSKQASCVVSFDASTAPESKNKDNFNSFPWSLKNLSVAHKPLPTLFFLYCVQLLLEETPIATNTNNMEERTQKTDAHEHGILKRIKEVIINMLPSRQNLAFAFKCSVSLGLAVFFGLTYDREHALWSGLTIAISFATRRQPKFSVANARGQGTAMGSIYGVICSFLFHRFGGFSFLPLLPWVVFCCFLMHSKMYGQAGGISAVIGALLILGRKNYGPPAEFAIARIAEATIGLTCFIVVEIILNPSRGKSLAKSQLSHSLKAFRDCIETIAIASSDKQKTCWNNSQELRKRQENLKSIVCQLQEFIEEAELEPNFWFLPFRGACYRKILDSLSTITDLLLFVAHSIENVSRLSQREGETAVQLQDRVNEDIELFKAKVGPTLKCLEEITQIKSLRKLERKWKKRNPSRDIELGEHPDADTIRVMRGHEEAESIACSFLQHLEEMADALHSNSSNEEAVIGQLIAHYSCLGFCISGLIRETIKIENEIKELVMWENPSSDSSLTEIYYKINALRS 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1305 813 Pfam Fusaric acid resistance protein-like 410 538 - -
Lele05g1305 813 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 11 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1305 Lele-ChrLele05 8121500 8124519 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1305 05 8121500 8124519 Lele05g1305 05 8121500 8124519 ECH
Lele05g1305 05 8121500 8124519 Lele07g1354 07 8167149 8170155 hybridization
Lele05g1305 05 8121500 8124519 Lele08g1158 08 7243519 7247221 hybridization