Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1104 ATGGGAGAATTCCACCGTCATCGTGCTGCTGGCTTCCTCTCTCCCACAAGCCGAGCGTCCATGGCAGCTTCTCTCTCCACCACGCTCTTGTCGAATTCTTTACAGCCCAAGAGAATTACGAAGCAGAGTTTAATCCTTAATCCCTCCAGCCTATCATCAAATAAGACTTTTAACCTTTCTCATGCTCTTGAATATCCTCACAATTTACTTAGACTCTCACCATGCAGACACCATGTCACTATAGCCTCCGCAGTGTCCAGTTCTACAGGGGTTCAGCCAAGCGAAGAAACAAGGAGTTCTCTGGATTCAGTGACAGTCTTCGATTTGAAAGGAAATGGAATTCCACTTTCTGACTTGTGGAAAGATAGAAAAGCTGTCGTTGCATTTGCTCGACATTTTGGGTGCGTGCTTTGCCGCAAAAGGGCTGATTATCTTGCCTCCAAGAAGGATATAATGGATGCATCTGGTGTGGCACTTGTACTGATTGGACCTGGAAGCATTGACCAGGCCAAAGCCTTCGCTGAAAAAACAAAATTTCAAGGAGAAATTTACGCAGATCCTGCTCATGCATCATATGAGGCCTTTGAATTTGTTTCTGGAGTTTTAACTACATTTACTCCCAATGCAGGTCTTAAAATAATCCAGTTGTACATGGAAGGTTACCGACAAGATTGGAAGCTGTCATTTGAAAAGGATACTGTTACCAGAGGAGGCTGGAAACAAGGAGGAATTATAGTTGCAGGTCCTGGTAAAAGTAACATCTCATACATTCACAAGGACAAAGAGGCAGGGGATGATCCAGACATTGAAGATATTTTAAAAGCATGCTGCTCGTGA 837 0.4385 MGEFHRHRAAGFLSPTSRASMAASLSTTLLSNSLQPKRITKQSLILNPSSLSSNKTFNLSHALEYPHNLLRLSPCRHHVTIASAVSSSTGVQPSEETRSSLDSVTVFDLKGNGIPLSDLWKDRKAVVAFARHFGCVLCRKRADYLASKKDIMDASGVALVLIGPGSIDQAKAFAEKTKFQGEIYADPAHASYEAFEFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVTRGGWKQGGIIVAGPGKSNISYIHKDKEAGDDPDIEDILKACCS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1104 278 PANTHER - 51 278 IPR032801 -
Lele08g1104 278 FunFam Thioredoxin-like protein AAED1 chloroplastic 99 277 - -
Lele08g1104 278 SUPERFAMILY Thioredoxin-like 104 198 IPR036249 -
Lele08g1104 278 Pfam AhpC/TSA antioxidant enzyme 145 261 IPR032801 -
Lele08g1104 278 CDD PRX_like2 104 261 - -
Lele08g1104 278 Gene3D Glutaredoxin 99 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1104 Lele-ChrLele08 6956371 6958707 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1251 05 7818398 7823178 Lele08g1104 08 6956371 6958707 hybridization
Lele06g1116 06 6949853 6952129 Lele08g1104 08 6956371 6958707 hybridization