Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1116 ATGGCAGCTTCTCTCTCCACCCCTCTCTTGTCGAATTCTTTACTGCCCAAGAGAATTACGAACCAGAGTTTAATACTTAATCCCTCCACCCTATCATCAAATAAGACTTTTAACCTTTCTCATGCTCTTGAATATCCTCACAATTTACTTAGACTCTCACCATGCAGACCCCATGTCACTATAGCCTCCGCAGTGTCCAGTTCTACAGGGGTTCAGCCAAGCGAAGAAACAAGGAGTTCTCTGGATTCAGTGACAGTCTTCGATTTGAAAGGAAATGGAATTCCACTTTCTGACTTGTGGAAAGATAGAAAAGCTGTCGTTGCATTTGCTCGACATTTTGGGTGCGTGCTTTGCCGCAAAAGGGCTGATTATCTTGCCTCCAAGAAGGACATAATGGATGCATCTGGTGTGGCACTTGTACTGATTGGACCTGGAAGCATTGACCAGGCCAAAACCTTCGCTGAAAAAACAAAATTTCAAGGAGAAATTTACGCAGATCCTGCTCATGCATCATATGAGGCCTTTGAATTTGTTTCTGGAGTTTTAACTACATTCACTCCCAATGCAGGTCTTAAAATAATCCAGTTATACATGGAAGGTTACCGACAAGATTGGAAGCTGTCATTTGAAAACGATACTGTTACCAGAGGAGGCTGGAAACAAGGAGGAATTATAGTTGCAGGTCCTGGTAAAAGTAACATCTCATACATTCACAAGCAGGACAAAGAGGCAGGGGATGATCCAGACATTGAAGATATTTTAAAAGCATGCTGCTCGTGA 780 0.4269 MAASLSTPLLSNSLLPKRITNQSLILNPSTLSSNKTFNLSHALEYPHNLLRLSPCRPHVTIASAVSSSTGVQPSEETRSSLDSVTVFDLKGNGIPLSDLWKDRKAVVAFARHFGCVLCRKRADYLASKKDIMDASGVALVLIGPGSIDQAKTFAEKTKFQGEIYADPAHASYEAFEFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKLSFENDTVTRGGWKQGGIIVAGPGKSNISYIHKQDKEAGDDPDIEDILKACCS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1116 259 SUPERFAMILY Thioredoxin-like 84 178 IPR036249 -
Lele06g1116 259 CDD PRX_like2 84 240 - -
Lele06g1116 259 Gene3D Glutaredoxin 79 257 - -
Lele06g1116 259 FunFam Thioredoxin-like protein AAED1 chloroplastic 79 258 - -
Lele06g1116 259 Pfam AhpC/TSA antioxidant enzyme 125 241 IPR032801 -
Lele06g1116 259 PANTHER - 53 259 IPR032801 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1116 Lele-ChrLele06 6949853 6952129 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1116 06 6949853 6952129 Lele07g1297 07 7856245 7859249 hybridization
Lele06g1116 06 6949853 6952129 Lele08g1104 08 6956371 6958707 hybridization