Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1040 ATGGTTTTATATGAAAATTCAGATATTATTCAGTGGGGTCTTCGTCTTCTTGATGGCGACCCTAGTTACAATCCAGGATACTATGGTGACATAATTCAACATGATACTGGTAACATATATGATGGAAACTACTACCATGGCCATTATAATGATGAGAGTAATCATATAGAGAATGATGAGATGATTGCACGGACCCTTCAAGAAGAATTTTCACAGCTAGACATAGCTGAAAGTTCTAAATATTCACAGGCAAGTGAGGAGCATTATCATGCTCCTGAGCTGGCATATGGGTGGCATAACTCTTCAACGATGAACCATGGCTCAGAAGACCATGATTACGTCCAGGAAGGAATTGATGATGTAGAACATTATAGTTCATGTTCTAGTCCTTGCGAAGGGGGAGAATACTCATTGGAGCTGACTGACCCACTTAAAGATGAAGTGGGAAGGAGATTGTGTCAAATGACTACAATTCCTCATGTTCCAAGAATTAATGGAGATATTCCTTCAATAGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGGTTGCGGTTATATGACTTTGTAGAGCGCAAGGTACCAGGTGATGGTAATTGTCAGTTTCATGCATTATCGGATCAATTGTATGACACACCTGAGTACCACAAGTTTGTGAGACAACAAGCAGTAAACCAGCTTAAGTCTCATCCGGAGATTTATGAGGGATATGTTCCCATGGAATACGGTGAATATTTGGAGAAGATGTCTAAGAGTGGTGAATGGGGTGATCATGTCACTCTTCAAGCGGTTGCAGATTCGTACGGTGTGCAAATATTCTTGATTACTTCTTTCAAGGATACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAAGAGTTATTTTCCTGAGCTTTTGGGCAGAAGTGCATTACAATTCCATCTATCCTCAAGGAGATATGCCTTCGAGCGAGTCAAGGAGGAAGAAAAGGTGGTGGAACTTTGGGAGACTGAGACTGACGGACTATTCTCAAATCTCTACTGGCCAATTTATTACTATAACATTTCGATAG 1062 0.404 MVLYENSDIIQWGLRLLDGDPSYNPGYYGDIIQHDTGNIYDGNYYHGHYNDESNHIENDEMIARTLQEEFSQLDIAESSKYSQASEEHYHAPELAYGWHNSSTMNHGSEDHDYVQEGIDDVEHYSSCSSPCEGGEYSLELTDPLKDEVGRRLCQMTTIPHVPRINGDIPSIDEATSDHQRLLDRLRLYDFVERKVPGDGNCQFHALSDQLYDTPEYHKFVRQQAVNQLKSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVTLQAVADSYGVQIFLITSFKDTCCIEILPHFEKPKRVIFLSFWAEVHYNSIYPQGDMPSSESRRKKRWWNFGRLRLTDYSQISTGQFITITFR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1040 353 FunFam OTU domain-containing protein 172 318 - -
Lele08g1040 353 SUPERFAMILY Cysteine proteinases 177 314 IPR038765 -
Lele08g1040 353 ProSiteProfiles OTU domain profile. 190 314 IPR003323 -
Lele08g1040 353 Pfam OTU-like cysteine protease 196 282 IPR003323 -
Lele08g1040 353 PANTHER OTU DOMAIN CONTAINING PROTEIN 52 316 - -
Lele08g1040 353 Gene3D - 171 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1040 Lele-ChrLele08 6605539 6608965 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1233 07 7474920 7479470 Lele08g1040 08 6605539 6608965 ECH
Lele06g1058 06 6575082 6578359 Lele08g1040 08 6605539 6608965 ECH
Lele08g1040 08 6605539 6608965 Lele06g1058 06 6575082 6578359 ECH
Lele08g1040 08 6605539 6608965 Lele07g1233 07 7474920 7479470 ECH
Lele08g1040 08 6605539 6608965 Lele08g1040 08 6605539 6608965 ECH
Lele06g1058 06 6575082 6578359 Lele08g1040 08 6605539 6608965 hybridization