Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1233 ATGGTTTTATATGAAAATTCAGATATTATCCAGTGGGGTCTGCATCTTCTTGATGGCGACCCTAGTTACAGTCCAGGATACTACGGTGACATAATTCAACATGATACTGGTAGCATATATGATGGAAACTACTACCATGGCCATTATGATGCTGAGAGTAATCATATAGAGAATGATGAGATGATTGCACGGACTCTTCAAGAAGAATTTTCACAGCTAGACATAGCTGAAAGCACTAGATATTCACAGGCAAGTGAGGAGCATTACCATGCTCCTGAGTTGGCATATGGATGGCATAACGCTTCAACGGTGAACCATTGCTCAGAAGACCATGATTATGTCCAGGAAGGAATTGATGATGTAGAACATTCTAGTTCATGTTCTAGTCCTTGTGAAGGGGGAGAATACTCATTGGAGCTGACTGATCCACTTGATGATGAAGTGGAAAGGAGATTGAGTCAAATGACTACAATTCCTCATGTTCCAAGAATTAATGGAGATATTCCTTCAATAGATGAAGCAACTTCAGATCATCAAAGGCTTCTGCATAGATTGCAGTTATATAACTTTGTAGAGCGGAAGGTACCAGGTGATGGTAATTGTCAGTTTCATGCATTATCTGATCAATTGTACGACACACCTGAGTACCACAAGTTTGTGAGACGACAAGCTGTAAACCAGCTTAAGTCTCATCCGGAGATTTATGAGGGATATGTTCCCATGGAATATGGTGAATATTTGGAGAAGATGTCTAAGAGTGGTGAATGGGGTGATCATGTGACTCTTCAAGCAGTTGCAGATTCGTACGGTGTGCAAATATTCTTGATTACTTCTTTCAAGGATACGTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAAAAAGAGTTATTTTCCTTAGCTTTTGGGCAGAGGTGCATTACAATTCCATCTATCCTCAAGGAGATATGCCTTCGAGCGAGTCAAGGAGGAAGAAAAGGTGGTGGAACTTTGGGAGGTGGACTCGGCAAGGAACTGAGGCTGCGGAGGACGATATCGCAGCGTTGCTGGTGGATACCGGCTCCGCGGGAACCGTTCCGGGCAGTGGATCTTCGAGGGTGGGAGAGTTGCACATTGGAGTCAGATTCAGCGGTGGTGGGTGGCCCCGTGTTAGATTTAGGGTCGGATTGGGAGAATCTGTGGAGGACCACCTCGGAGCTCATATGAGGAGCGTTAGGGTTTTGGAAGGGAAGGCAGTGGCAATGTTAGGGTTTCTGTTGGGTGGTGGTTTTTGGGTGGGGGCAGAAGAGGGGGGTGGGGGGAGCGGGGTCGCGGCGGCAGAGAGAGTTGGTAGTGATAGATTCGATTGA 1350 0.4548 MVLYENSDIIQWGLHLLDGDPSYSPGYYGDIIQHDTGSIYDGNYYHGHYDAESNHIENDEMIARTLQEEFSQLDIAESTRYSQASEEHYHAPELAYGWHNASTVNHCSEDHDYVQEGIDDVEHSSSCSSPCEGGEYSLELTDPLDDEVERRLSQMTTIPHVPRINGDIPSIDEATSDHQRLLHRLQLYNFVERKVPGDGNCQFHALSDQLYDTPEYHKFVRRQAVNQLKSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVTLQAVADSYGVQIFLITSFKDTCCIEILPHFEKPKRVIFLSFWAEVHYNSIYPQGDMPSSESRRKKRWWNFGRWTRQGTEAAEDDIAALLVDTGSAGTVPGSGSSRVGELHIGVRFSGGGWPRVRFRVGLGESVEDHLGAHMRSVRVLEGKAVAMLGFLLGGGFWVGAEEGGGGSGVAAAERVGSDRFD 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1233 449 FunFam OTU domain-containing protein 172 318 - -
Lele07g1233 449 ProSiteProfiles OTU domain profile. 190 314 IPR003323 -
Lele07g1233 449 PANTHER OTU DOMAIN CONTAINING PROTEIN 53 316 - -
Lele07g1233 449 Pfam OTU-like cysteine protease 196 282 IPR003323 -
Lele07g1233 449 Gene3D - 171 318 - -
Lele07g1233 449 SUPERFAMILY Cysteine proteinases 177 314 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1233 Lele-ChrLele07 7474920 7479470 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1233 07 7474920 7479470 Lele08g1040 08 6605539 6608965 ECH
Lele06g1058 06 6575082 6578359 Lele07g1233 07 7474920 7479470 ECH
Lele07g1233 07 7474920 7479470 Lele06g1058 06 6575082 6578359 ECH
Lele07g1233 07 7474920 7479470 Lele07g1233 07 7474920 7479470 ECH
Lele08g1040 08 6605539 6608965 Lele07g1233 07 7474920 7479470 ECH
Lele06g1058 06 6575082 6578359 Lele07g1233 07 7474920 7479470 hybridization