Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0998 ATGGCAAAGAAGAGAAGGACGCCTGAGAAGAAGAGCCAAAAGATAATCCCAATTGATTGTATCTCAAAACATTCTCAACAGCGTAGGAGCACACCACCAAAACGCCGCACTGATTTCTCTGTGTTTATGCGCAGTCCTTCTTATCTCTCCAACCTAGTTTCTTCACATGGTTCATCTTCTGGAGATGTTAGATCAGACAGTGTCTCTGCAAACAGTTTACATGAGGATAGAATGAAAGAAGAACAATTCCTTGAAGGCACACTTGTTAAATGCAGTGGTTCCCATAGGGATGAAAATCTTGGTGCTCCAGTAACTGAAGTTGAATCAGTTATCCGAGATGAAGCTCTTGACCTTGGCAGCAATAGGGATGGTCAACGAGGAGAAAATAACACACTCAAGGTATCAGAATCCACATCACAGGGGTCACCTGTTACCGACAGCAATTGTATTATTATAACCCCAGGGAGTGTTGTATGGGCAAAAACATCATGTCAAGTGTGGTGGCCTGCGGAGATAATGGAAGAAAGACCCACCTTAGCTGGCCAGGCCTGTGATGGACATGTTTTGGTGCAGTTTTATGGGAATCAACCCTGTGCTTGGATTGATCCAGAGAAAGATCTTTCAGCATTTGAGGATTCTTTTGAAGAAAGGAGCAGTAACCCTGCAAAAGATTTTCAAGATGCTCTAAAACAAGCTTTGCAGAGGAAGGAACAACTTAGTCCTTGCAGAAAGTTAAGTCTCCAAAGGAATGTTCACTCGGATACGCAAGATCACTCATGTGAAAAATGGACTTCATCAGCCTCAAGCAAAACAATAGATGATTTAAAGGAGAGAGGAAGGGGTAAAAGAGAACGCAAGCGCAAACTTCATTTTGATGAGGTGGCATCTCCTCCGAAATCAGAAAGAAAAGCTCGCCGGTGGAAGATAATGCGGTACCTGGGCCTTATTGCTCCTGTTGAGGCCGTCCAGGTGCTGGTGTCGTCACTAGCAGATGATTCTTCCACTGTCAGGGAGGCTTCCATGGCCTCTCTCGAGGACATTGAAGCTCTGAATCCTCTTTTAGTTCTCGATTGCTGTGCAGTTGTTTCACGAGGAGGACGTCGGCGATTCGGAAACATGGCCGGTGTTTTCCAAGTGATGGCATTTGGAGTTCGCTCTCTGGAAAAAAGAGAAGTCGATGATTCTTTCATGGCAAAGCTCGCTAAGATTGCTACAGCTGAAATGATATCCTCTAAGGAAATCAATTCAGAATGGCAACGAGCAGCATCAGGTCTACTTGTTGCAATTGGTTCACATTTACCGGACCTAATGATGGAAGAAATTTTTCTACATTTATCTGGCCCAAATTCAGCATTACTGGCTATGGTCCAAATACTTGCAAAATTTGCTTCTACTGATCCCCTGCAGTTTATTCCTCGGTGGAAAGGTGTACTTTCACGAATTCTGCCAATTCTTGGAAATGTGAGAGATGTGCATCGGCCAATTTTTGCTAATGCATTTAAGTGTTGGTGTCAAGCTGCTTGGCAATATAGTATGGATTTTCCTTCACATTCACCCCTTGAAGGAGATATCATGTCATTTTTAAATTCTGCTTTTGAGCTTTTTCTTAGAGTTTGGTCAACTTCACGGGATCTAAAGGTTCGTGTGGCATCTGTGGAAGCCCTGGGTCAGATGGTTGGTCTCATAACACGCAACCAACTAAAGGCTGCTTTACCAAGGCTTATTCCTACAATATTGGATTTATACAAAAAGGATCAAGATATTGCTTTTCTGGCAACGTGCAGTCTTCACAGCCTCTTAAATGCCTCTCTTCTGTCTGAAAGTGGTCCTCCTATGATTGATTTTGAGGACCTACCACCGATACTGTCAACACTTCTCCTGGAAGTTTGTATCAATACCGATGGCAAAGAACAAGTGGGACTGAGGACATATAATGAGGTTCAGCATTGCTTTCTTACAGTTGGCTTGGTGTATCCAGATGATTTATTTGTATTCCTGAAATGCAGGCTGGGGGAAGAACCATTGACCTTCAGTGCACTTTGTGTTCTGAAGCACCTTTTGCCCAGGTTATTGGAAGTTTGGCACAATAAAAGGCCTCTGCTAGTTGAAGCTGTGAAATCCTTGCTAGATGAGCAGAATTTAGGTGTCCGAAAGGCACTTTCAGAGTTGATTGTGGTCATGGCTTCACACTGTTACTTGGTTGGTTCATCTGGTGAGTCGTTCGTTGAATATCTCGTACGCCATGGTGCTCTGACAGATCAAAATCAGAGTGATATTGATGACAGGCCAAATAAGAAAGTTGAGATGAGAATTGGTGCAGTGACTTCAGGGAACTTGAGAGCAATTTGTGAGAAAGGGCTCCTTCTGATAACTATTACGATTCCTGAAATGGAGCACATTCTTTGGCCTTTTCTGCTGAAAATGATTATTCCACGGATCTATACAAGTGCTGTTGCCATGGTTTGCAGGTGTATCTCTGAATTGTGGCGGCATAGATCGCATGACAATGATATGTTGAGTGACTGTAAAAACAATGCCAGTATACCGGCTGTTGAGGAACTTTTTGCTCGTTTGGTGGTGCTTTTGCATAATCCTCTGGCAAGGGGGCAGTTGGCTACCCACATTTTGACTGTTCTTTATCATCTCGCACCTTTGTTTCCAAAAAACATCAATTTGTTGTGGCAAGATGAGATTCCAAAGATGAAGGCATATGTTAGTGATACAGAAGACTTGAAACAGGATGTATCATATCAAGACACTTGGGATGACATGATAATCAATTTTCTTGCAGAATCTTTGGATGTGATTCAAGATTCAGATTGGATAATGTCTCTTGGTAATGTTTTTGCCAAACATTATGAACTTTATGCATCTGATGATGAACATACTGCTCTTCTTCACAGATGCTTGGGAATGCTTCTTCAAAAGGTTAATGACAGAGCTTATGTTCGTGATAAGATAGATTGGATGTATATACAGGCCAACATTACTATTCCAACAAATAGGCTGGGGTTAGCTAAAGCAATGGGATTGGTTGCTGCTTCTCACTTGGATACAGTGTTGGGGAAGCTGAAGGATATTCTGGATAATGTTGGACAGAGCATGCTTAATAGGATATTGTCATTCTTCTCTGATAGTTTTAGGACAGAAGACACTGATGACATACATGCTGCTTTGGCTCTAATGTATGGATATGCTGCAAAGTATGCCCCATCAACGGTTATTGAAGCCAGAATAAATGCCCTAATAGGGACTAACATGCTTTCAAGGCTTCTACATGTGCGAAACCCCAGATCCAAGCAGGCGGTCATTACAGCAATTGATTTATTAGGTAATGCTGTTATTAATGCTGCTGAAAGTGGCACACCATTTCCATTGAAAAGAAGGGATCAATTGCTTGATTATATATTAACTTTGATGGGTCGAGATGACAATGATGGCTTTGCTGATTACAATGAACTTTTACGTACTCAGGCCCTTGCTGTCAGTGCCTGCACTACATTGGTCTCTGTAGAGCCCAAACTAACAGTCGAAACCAGAAAACATGTAATGAAGGCCACGTTAGGGTTCTTTGCTGTACCAAATGATCCAGTAGATGTTGTCAACAACCTCATAGACAACCTGATCACTCTTCTATGTTCCATGCTTCTCAGTAGTGGAGAGGATGGAAGAAGTCGGGCAGAGCTTCTATTACATATTTTGAGGCAAATTGATCAATTTGTTTCTTCCCCCATTGAGTATCAAAGGAAAAGAGGTTGTCTTGCAGTCCATGAGATGCTTCTCAAGTTTCGGATGGTTTGTGTGGGTGGGTATTGTGCAGTTGGCTGCCGTGAGATTTGCACACATAACAAGCAAATTGACCAGACTCTATATGGGAACTACTCAAAACTTCCAACCGCATTTATATTGCCCAGCCGTGAAGCTTTGTGTGTAGGAGATAGAGTGATAATGTATCTTCTACGTTGTGTTGACACAAATTCGGAAGTTCGAAAAATATCTGCTCAAATTCTTGATCAACTCTTCAGCATCTCTCTCTCTCTTCCACGGCCTGCAAATTCTTCTATGACTTCTGAAGATATAGAATTGTCATATGGTGCTTTGTCTTCGTTAGAGGATGTTATTGCCATATTAAGGAATGATACTTCCATTGATCCATCAGAAGTTTTCAACAGGATTATAATGGTTCCATTGATGATTTTCTGGCAGTTGGTAGTTACACTGCATAATTGCTCTGTAGCAATTTGTGATAAGATCAAGCAGTCAGCTGAAGGAGCTATTCTAGCTGTTATTGAGTTTGTTACAAAGAGGGGGAATGAGCTGAGTGAAATTGACATCTCAAGGACAACCCAATCACTGATCTCTGCCACTGTTTACGTAACTGATAAGCATTTGCGTGTGGAAACTCTTGGTGCTATATCTTCTATGGCTGAAACCACTAGTCCAAAAATTGTTTTTGATGAAGTCCTGGCTACTGCTGAAAGGGATATAGTGACAAAGGATATATCTAGGCTCCGTGGTGGCTGGCCCATGCAGGATGCATTCTATGTATTTTCTCAGCACATGGTGCTGTCAACATCTTTTCTGGAACACGTGATATCTGTACTTTGCCAAGCTTCTATCTTCAAAGTTGATTTGGACAGTGTTGCGGATAGCCATGTTGTTGAAAACCAGACAGAGGATGGCATGCTGCAGGCTGCAATACTAGCTCTTACTGCTTTCTTTAGAGGTGGGGGAAAGATTGGGAAAAGGGCTGTTGAACAAAACTATGCCTCTGTTATATCTGAGCTAATGCTGCAACTTGGAAGCTGTCATGGCCTAGCTAACTCGGGTCAGCAGGAACCATTACGGGGTCTACTTACTGCATTTCAAGCATTCTGTGAATGTGTCGGTGACCTTGAGATGGGCAAGATCTTGGCAAGAGATGGAGAACTGTCTGAAAATGAGAGTTGGGTTAATCTCATTGGAGACATAGCTGGCTGCATATCTATAAAGAGGCCAAAAGAGGTACAAAGTATTTGTCTATTTTTGACAAAATCGTTGGACCGACCCCATAAATACCATCAGGAAGCTGCAGCGGCAGCATTGTCAGAATTTATTTGCTATAGCAGCGGAGTTAAATCATTCTTAGAGCACATGATTGAGGTTTTATGTCAGCATGCATTTGATGAATCTTCAACTGTTCGACGCTTATGTTTGAGAGGGCTAATTCCATCAATTAATATTCTGGAGTATGCAACTCAAGTTTTAGGGGTCATATTAGCTCTGCTGGATGATTCGGATGAATCTGTGCAATTAACTGCTGTATCATGCTTGCTGATGATCCTGGAATCTTCGCCTAATGATGCAGTTGAGCCCATTTTGCTTAATCTTGCTGTACGGCTTCGAAATCTTCAGGCAAGCATGAATGCAAAGATGCGAGCTAGTTCTTTTGCAGCCTTTGGAGTGCTTAGCAATTATGGAATGGGAGCACAAAGGGAGGCGTTTCTTGAGCAGGTACATGCTGCCGTTCCTCATGTTGTTTTGCATCTGCATGATGAAGATGTCAGTGTCAGGCAGGCCTGTCGGATAACCCTGAAGCGGGTTTGCTCGATGATGGAAAGTGAAGGGTTGCTTGCACCGGTGAACACGCACAGTTTTCTTTCTGATCACCGAAGTAACTATGAGGACTTCCTCAGAGACATTGCCAAACATTTTATCCAGCATCTTTCCTCCAGAGTTGAGACGTATATGGCAGCAACAGTTCAGGCTTTTGATGCCCCGTGGCCAATGATTCAAGCAAATGCTGTATACTTCTCCAGCAGCATACTCTCTCTATCGGACGACCCACATGTTTTAACACACTACCATACGCAGGTATTTGGGATGCTGGTGAGCAAAATGAGTCGATCACCGGCTGAAGTTGTGAGAGCAACGTGTTCTGCTGCTCTGGGCTTGTTACTAAAATCCTCCAATTCTTGTTCATTGTCATCGGCTCAGCTGGATCGAGTGGACTCAGCACGGAGGAGCCATGAACAAGAGTCTCCCATGAGTTAG 6033 0.4278 MAKKRRTPEKKSQKIIPIDCISKHSQQRRSTPPKRRTDFSVFMRSPSYLSNLVSSHGSSSGDVRSDSVSANSLHEDRMKEEQFLEGTLVKCSGSHRDENLGAPVTEVESVIRDEALDLGSNRDGQRGENNTLKVSESTSQGSPVTDSNCIIITPGSVVWAKTSCQVWWPAEIMEERPTLAGQACDGHVLVQFYGNQPCAWIDPEKDLSAFEDSFEERSSNPAKDFQDALKQALQRKEQLSPCRKLSLQRNVHSDTQDHSCEKWTSSASSKTIDDLKERGRGKRERKRKLHFDEVASPPKSERKARRWKIMRYLGLIAPVEAVQVLVSSLADDSSTVREASMASLEDIEALNPLLVLDCCAVVSRGGRRRFGNMAGVFQVMAFGVRSLEKREVDDSFMAKLAKIATAEMISSKEINSEWQRAASGLLVAIGSHLPDLMMEEIFLHLSGPNSALLAMVQILAKFASTDPLQFIPRWKGVLSRILPILGNVRDVHRPIFANAFKCWCQAAWQYSMDFPSHSPLEGDIMSFLNSAFELFLRVWSTSRDLKVRVASVEALGQMVGLITRNQLKAALPRLIPTILDLYKKDQDIAFLATCSLHSLLNASLLSESGPPMIDFEDLPPILSTLLLEVCINTDGKEQVGLRTYNEVQHCFLTVGLVYPDDLFVFLKCRLGEEPLTFSALCVLKHLLPRLLEVWHNKRPLLVEAVKSLLDEQNLGVRKALSELIVVMASHCYLVGSSGESFVEYLVRHGALTDQNQSDIDDRPNKKVEMRIGAVTSGNLRAICEKGLLLITITIPEMEHILWPFLLKMIIPRIYTSAVAMVCRCISELWRHRSHDNDMLSDCKNNASIPAVEELFARLVVLLHNPLARGQLATHILTVLYHLAPLFPKNINLLWQDEIPKMKAYVSDTEDLKQDVSYQDTWDDMIINFLAESLDVIQDSDWIMSLGNVFAKHYELYASDDEHTALLHRCLGMLLQKVNDRAYVRDKIDWMYIQANITIPTNRLGLAKAMGLVAASHLDTVLGKLKDILDNVGQSMLNRILSFFSDSFRTEDTDDIHAALALMYGYAAKYAPSTVIEARINALIGTNMLSRLLHVRNPRSKQAVITAIDLLGNAVINAAESGTPFPLKRRDQLLDYILTLMGRDDNDGFADYNELLRTQALAVSACTTLVSVEPKLTVETRKHVMKATLGFFAVPNDPVDVVNNLIDNLITLLCSMLLSSGEDGRSRAELLLHILRQIDQFVSSPIEYQRKRGCLAVHEMLLKFRMVCVGGYCAVGCREICTHNKQIDQTLYGNYSKLPTAFILPSREALCVGDRVIMYLLRCVDTNSEVRKISAQILDQLFSISLSLPRPANSSMTSEDIELSYGALSSLEDVIAILRNDTSIDPSEVFNRIIMVPLMIFWQLVVTLHNCSVAICDKIKQSAEGAILAVIEFVTKRGNELSEIDISRTTQSLISATVYVTDKHLRVETLGAISSMAETTSPKIVFDEVLATAERDIVTKDISRLRGGWPMQDAFYVFSQHMVLSTSFLEHVISVLCQASIFKVDLDSVADSHVVENQTEDGMLQAAILALTAFFRGGGKIGKRAVEQNYASVISELMLQLGSCHGLANSGQQEPLRGLLTAFQAFCECVGDLEMGKILARDGELSENESWVNLIGDIAGCISIKRPKEVQSICLFLTKSLDRPHKYHQEAAAAALSEFICYSSGVKSFLEHMIEVLCQHAFDESSTVRRLCLRGLIPSINILEYATQVLGVILALLDDSDESVQLTAVSCLLMILESSPNDAVEPILLNLAVRLRNLQASMNAKMRASSFAAFGVLSNYGMGAQREAFLEQVHAAVPHVVLHLHDEDVSVRQACRITLKRVCSMMESEGLLAPVNTHSFLSDHRSNYEDFLRDIAKHFIQHLSSRVETYMAATVQAFDAPWPMIQANAVYFSSSILSLSDDPHVLTHYHTQVFGMLVSKMSRSPAEVVRATCSAALGLLLKSSNSCSLSSAQLDRVDSARRSHEQESPMS 2010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0998 2010 Pfam PWWP domain 155 234 IPR000313 -
Lele08g0998 2010 Gene3D - 146 245 - -
Lele08g0998 2010 Gene3D - 1737 1984 IPR011989 -
Lele08g0998 2010 ProSiteProfiles PWWP domain profile. 154 212 IPR000313 -
Lele08g0998 2010 MobiDBLite consensus disorder prediction 123 146 - -
Lele08g0998 2010 MobiDBLite consensus disorder prediction 43 68 - -
Lele08g0998 2010 SUPERFAMILY ARM repeat 1323 1986 IPR016024 -
Lele08g0998 2010 MobiDBLite consensus disorder prediction 271 297 - -
Lele08g0998 2010 SMART PWWP_4 152 208 IPR000313 -
Lele08g0998 2010 SUPERFAMILY ARM repeat 311 1031 IPR016024 -
Lele08g0998 2010 SUPERFAMILY Tudor/PWWP/MBT 153 242 - -
Lele08g0998 2010 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 362 1987 IPR045206 -
Lele08g0998 2010 SUPERFAMILY ARM repeat 1020 1238 IPR016024 -
Lele08g0998 2010 MobiDBLite consensus disorder prediction 116 146 - -
Lele08g0998 2010 MobiDBLite consensus disorder prediction 1 73 - -
Lele08g0998 2010 Gene3D - 319 587 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0998 Lele-ChrLele08 6346455 6379308 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1156 05 7248037 7252294 Lele08g0998 08 6346455 6379308 hybridization
Lele06g1015 06 6323354 6327599 Lele08g0998 08 6346455 6379308 hybridization