Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1156 ATGGCAAAGAAGAGAAGGACGCCTGAGAAGAAGGATTGTATCCCAAAACATTCTCAACAGCGTAGAAGCTCACCACCAAAACGCCGCATTGATTTCTCTGTGTTTATGCGCAGTCCTGCTTGTCTTTCCAACCCAGGTCGCTTCCTCTCTTTGATTTTATTTTCTTCACATGGTTCATCTTATGGAGAAGTTAGATCAGACAGTGTCTCCACAAACAGTTTACATGAAGATAGAATGAAAGAAGAACAAGTCCTTGAAGACACACTTGTTAAATGCGGTGGTTCCCGTGGGGATGAAAATCTTCACGCTCCAGTAACTGAAGTTGAATCAGTTACCCGAGATGAAGCCCTTGACCTTGGCAGCAATATGGATGGTCAACGAGGAAAAAATAACACACTCAAGGCATCAGAATCCACATCACAGGAGTCACCTGTTAATGGCCGCAATTCTATTACTATAACCCCAGGGAATGTTGTGTGGGCAAAATCATCGTGTCAAGTGTGGTGGCCTGCGGAGATCATGGAAGAAAGACCCACCTTAGCGGGCCAGGCCTGTGATGGACATGTCTTAGTGCAGTTTTATGGGAATCAAACCTGTGCTTGGATTGATCCAGTGACAGATCTTTCAGCATTTGAGGATGTGAGTTTTGGTTCTTTTTCCTACTGTTCTGCTTTTGAAGAAAGGAGCAGTAACCCTGCAAAAGATTTCCAAGATGCTCTAAAACAAGCTTTGCAGAGGAAGGAACAACTTAGTTCGTGCAGAAAGTTGAGTCCCCAAAGGACTGTTCGCCCGGATGTGCAAGATCACTCATCCTCAAGCAAAACAATAGATGATTTAAAGGAGAGAGGAAGGGGTAAAAGAGAACGCAAGCGCAAACTTCATTTTGATGAGGTGGCATCTCCTCCGAAATCAGAAAGAAAGGCTCGCCGGTTGAAGATAATGCGGTACCTGGGCCTTATTGCGCCGGTTGGTTCTCCTTATTGA 984 0.4492 MAKKRRTPEKKDCIPKHSQQRRSSPPKRRIDFSVFMRSPACLSNPGRFLSLILFSSHGSSYGEVRSDSVSTNSLHEDRMKEEQVLEDTLVKCGGSRGDENLHAPVTEVESVTRDEALDLGSNMDGQRGKNNTLKASESTSQESPVNGRNSITITPGNVVWAKSSCQVWWPAEIMEERPTLAGQACDGHVLVQFYGNQTCAWIDPVTDLSAFEDVSFGSFSYCSAFEERSSNPAKDFQDALKQALQRKEQLSSCRKLSPQRTVRPDVQDHSSSSKTIDDLKERGRGKRERKRKLHFDEVASPPKSERKARRLKIMRYLGLIAPVGSPY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1156 327 MobiDBLite consensus disorder prediction 118 150 - -
Lele05g1156 327 PANTHER PWWP DOMAIN-CONTAINING PROTEIN 60 315 - -
Lele05g1156 327 MobiDBLite consensus disorder prediction 1 28 - -
Lele05g1156 327 SUPERFAMILY Tudor/PWWP/MBT 150 255 - -
Lele05g1156 327 SMART PWWP_4 153 209 IPR000313 -
Lele05g1156 327 MobiDBLite consensus disorder prediction 254 269 - -
Lele05g1156 327 Gene3D - 145 257 - -
Lele05g1156 327 ProSiteProfiles PWWP domain profile. 155 213 IPR000313 -
Lele05g1156 327 MobiDBLite consensus disorder prediction 254 306 - -
Lele05g1156 327 MobiDBLite consensus disorder prediction 124 150 - -
Lele05g1156 327 Pfam PWWP domain 156 245 IPR000313 -
Lele05g1156 327 MobiDBLite consensus disorder prediction 1 29 - -
Lele05g1156 327 MobiDBLite consensus disorder prediction 270 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1156 Lele-ChrLele05 7248037 7252294 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1156 05 7248037 7252294 Lele07g1197 07 7256746 7260994 hybridization
Lele05g1156 05 7248037 7252294 Lele08g0998 08 6346455 6379308 hybridization