Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0944 ATGGAGTCAAGTTCAGATGATGAGCATGTTATACTGGTCTGCAAAAACCCCAATTCAATTGAAACAGAGACTGAGAAGGAAGAAATTATAATATCTACCGCAGATATCCTCAACTGGGATCTTCAGACTATTCTCCGTTTACCAACGATCAAAATTCGGGCAAGTCGAAGTAGGCTCATCGAGCAATGTTCTTATTTCCGGGGCCTCTTCCGTGGGAGCTTCAGTGAATCATGCCTGGGCTCTACCATTGTCGAGTGGAATGTGCTACCATTTATGGACATTCTGAAGTATCTATATGGATGCCCGTTGGAGATTACATCGGCTAATTTCCTCTCTCTTTATGAGGGTGCACTTTATTTTGGTGTGGACTCACTTCTATTGAAGTGCAAAATATGGTTTTCTGATGTGTCCTCATCCAAAGGATCTCAACCAATACAGATGCAAATGGAGGACATAATTCTAATTTGGAAATTTGGTTTGGAGCATGAAATTGATTTTATGCTGGAATTATGCACAATCTATCTAGCAAGAAATTTTATGTGGGCATCGAATAGCACTTTATTTGACAAGATTCCATATGATATGTTGTTGTCTTCTATAGAGCATCCTCACCTGACTGTTGAAAGTGAAATGCATCTTTCTGATGCACTTTTACGCTGGCTTGAGTGTAACTTCGAGAATGTGGAAACCTTGGGCAGAGGTGAATACGACTGTGACAGAATGTTGAAACAAATTCGTGTTGGCCTTTTGCCTTTGTGGTTTGCAGCAGGGAAAAGAAACTCTTTATTTTTCAGACAGCTTGCTGAAGAAAGCGTTGATTCAATTTTCAGACAATTAAATATTCCAACCTTGGGTTCACAAAATCTTTTAGGATATGATGGCTTGCAGCATCTCAGGATTCGGCTGACAGAATATTCCAAGAAAGTGGACCTTTCAGACTGTCCCCAAATAACACCTGCAATCCTGCTTGTGTCACTGGTCCCTCTATCACCTCCAATGGACCTCGGATCAAGAGATATTATTGAGCTGCTTTACAATAACTTTGAACACCTTATAAGAGACAAACGTGCATTCCCACAAATAATGTTGCGAACTTTGTCCTTTGAAGCAGTTCAGGAGGTAGATATCTCAAAGTGTCAAAGATTGCCAATTGAATGTGCCATTGAATGCTTTTGCAAGTCCTTTCCTTCTTTAAAAATATTGAGAGCTGCTTATCTTCTGAACATCAGAACAACCGATTTTCTTCGATTAGCACTGAAGTGCCCTCAGGTCTGTGAAATTGATTTGACTGTTGACATTACTCCACTAATGCCAGCATTAGTTTCAATCGTGTCATCAAGTCTTTCGGTGACATCACTGGTATCAGAGAAGGCTTCTAGTGTGAAATATGATGCTGTGGATGCCTTCTCATTCTATGAATTTGGACTACCACTTTCTAACATTACCAAGCTCACCTTGGAAGGAAGAACTGATATCTATGATTCAGATCTCCAGTACTTCTCCAAAATTTGTCTTTCACTGCATCACCTGAATCTTAAAGGATGCATTTCAGTCACAGACACTGGCATATCAAATCTCATACGCAAATGTATAAAACTTGACTCAATTGTGGTTTGCGATACTTCTTTTGGGGAAAATTCAGTTCAAGCTCTTTCCTCAGCTATTTCTGATTATGGTAGCTTTTCCTCTCAACATATTAGAGATAAGCATTTGAGTTCTGTAGCATCTAACCTTCAAATCCTGCATATGGGGGGCTGCCGAGGTATAAATAAGTTATCTCTACTCAAGCTTATGTCTCAAATGAAACTGCTGAGGGGTTTATGCATGAGAGGGACAGACATGGTTGACCAAGCACTTTATAACTTCCCAGGTTCTTCCTTGGAGATGCTTGATGTTTCAGATACCCAGATTTCGGGAGCTGCATTAGCTCACATTATTCATGGAAATCCAAATTTAAAGTGTCTAAAAGTTAGAGGCTGTAGTAATTTATTTCAAGAGGAAAATTGTACTGAGGAAAGAGAATCTATCTTCTCTTGTTTGCATGAAGAACTGTGCACCAAGCTAGGAAAGATGTGCAGATTGGAAGAAGTTGAATTTGGATGGGGCTTTCCATCACTCTCCTTGAAAGCTATGGAACCTGCACTGATGACGTTACAGAGAATCAATGTAGGTTTAGGTGGAATGCTTGGTGAAGAAGCATTGAGAAAACTACCGGCAATTTGTCCCATGCTAGAAACAATAATATTTCAGTTTCAGGTAATATCTGATAGTGTTGTGGTGAACATAGCTACATCCTTGACAAACTTGCAAGAGTTAGCTTTGTGCTATTGTTTTGGTGATATGTCCATATCAAGCTTCAAATTCTTCACGCGAAATCTTAGAAAGTTGAGGCTTCAAAGAGTAACCCCGTGGATGACCAATGATGATTTGGATATTTTGACTCAAAACTGCAGAAATTTGGTTGAGCTTTCTTTATTAGGATGTCCTCTTCTTAACCCAGATTCTCAACATATAATTTCCCGTGGATGGCCAGGCCTCATTTCAATCCATTTAGAGGAATGTGGAGGAATAACAGCAAATGGGGTCTCTTCTCTTTTTGACTGCAAAGCTATTGAAGATCTCCAGCTGCGTCATAATGGACCTGGGCTGCAGAAAAACTTCATTTTTGATGCTGCTTCAAAGATTCCAATGCTTCGACAGTTGTCTCTGGACATATGCGATGCAAGCAAAGGTGATTTTGACATTCCAAAAATCCATGCAGACAGATACTTCTTGAGTAGCTTGAAGATAGCGAGATGCAAATACCAAAGATGTGCATTTAATCTCCCAGCCCCCTCCCGGGGAGTGTGTAGTAGGTCTCTGCACGTGGAGACAATGGTATTTGTATGGAACAGCAGAGATCTCACTAGAGCAGTTGTGAAGGAAAGGCTTTGA 2934 0.4025 MESSSDDEHVILVCKNPNSIETETEKEEIIISTADILNWDLQTILRLPTIKIRASRSRLIEQCSYFRGLFRGSFSESCLGSTIVEWNVLPFMDILKYLYGCPLEITSANFLSLYEGALYFGVDSLLLKCKIWFSDVSSSKGSQPIQMQMEDIILIWKFGLEHEIDFMLELCTIYLARNFMWASNSTLFDKIPYDMLLSSIEHPHLTVESEMHLSDALLRWLECNFENVETLGRGEYDCDRMLKQIRVGLLPLWFAAGKRNSLFFRQLAEESVDSIFRQLNIPTLGSQNLLGYDGLQHLRIRLTEYSKKVDLSDCPQITPAILLVSLVPLSPPMDLGSRDIIELLYNNFEHLIRDKRAFPQIMLRTLSFEAVQEVDISKCQRLPIECAIECFCKSFPSLKILRAAYLLNIRTTDFLRLALKCPQVCEIDLTVDITPLMPALVSIVSSSLSVTSLVSEKASSVKYDAVDAFSFYEFGLPLSNITKLTLEGRTDIYDSDLQYFSKICLSLHHLNLKGCISVTDTGISNLIRKCIKLDSIVVCDTSFGENSVQALSSAISDYGSFSSQHIRDKHLSSVASNLQILHMGGCRGINKLSLLKLMSQMKLLRGLCMRGTDMVDQALYNFPGSSLEMLDVSDTQISGAALAHIIHGNPNLKCLKVRGCSNLFQEENCTEERESIFSCLHEELCTKLGKMCRLEEVEFGWGFPSLSLKAMEPALMTLQRINVGLGGMLGEEALRKLPAICPMLETIIFQFQVISDSVVVNIATSLTNLQELALCYCFGDMSISSFKFFTRNLRKLRLQRVTPWMTNDDLDILTQNCRNLVELSLLGCPLLNPDSQHIISRGWPGLISIHLEECGGITANGVSSLFDCKAIEDLQLRHNGPGLQKNFIFDAASKIPMLRQLSLDICDASKGDFDIPKIHADRYFLSSLKIARCKYQRCAFNLPAPSRGVCSRSLHVETMVFVWNSRDLTRAVVKERL 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0944 977 CDD BTB_POZ_ZBTB_KLHL-like 44 120 - -
Lele08g0944 977 Gene3D - 148 268 - -
Lele08g0944 977 Gene3D Potassium Channel Kv1.1; Chain A 25 136 IPR011333 -
Lele08g0944 977 SUPERFAMILY POZ domain 45 130 IPR011333 -
Lele08g0944 977 Pfam BTB And C-terminal Kelch 155 254 IPR011705 -
Lele08g0944 977 SMART LRR_CC_2 624 648 IPR006553 -
Lele08g0944 977 SMART LRR_CC_2 504 529 IPR006553 -
Lele08g0944 977 SMART LRR_CC_2 478 503 IPR006553 -
Lele08g0944 977 SMART LRR_CC_2 817 842 IPR006553 -
Lele08g0944 977 SMART LRR_CC_2 575 600 IPR006553 -
Lele08g0944 977 SMART LRR_CC_2 741 765 IPR006553 -
Lele08g0944 977 SMART LRR_CC_2 843 868 IPR006553 -
Lele08g0944 977 Gene3D Ribonuclease Inhibitor 269 557 IPR032675 -
Lele08g0944 977 ProSiteProfiles BTB domain profile. 41 107 IPR000210 GO:0005515
Lele08g0944 977 PANTHER UNCHARACTERIZED 223 663 - -
Lele08g0944 977 Gene3D Ribonuclease Inhibitor 558 942 IPR032675 -
Lele08g0944 977 SUPERFAMILY RNI-like 475 702 - -
Lele08g0944 977 SUPERFAMILY RNI-like 680 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0944 Lele-ChrLele08 5943853 5955045 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0957 06 5891771 5908025 Lele08g0944 08 5943853 5955045 hybridization