Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0957 ATGAGTGAGAATATCCACGCGTTGCTGAAGGATATTGCCAACGTTGAACTAAAGCTAGTACAATCTCCAATATTCATTCATCTTCCATTGCAAAAAGAAGGTGTGCGTTCCTGGGTGGGTTTACTCACCCACTCTAGGGGGAATGTTACGCTCAACCGATCTCATTTAACATTGTCCATGGAGTCAAGTTCAGATGATGAGCATGTTATACTGGTTTGCAAAAACCCCGATTCAATTGAAACGGAGACTGAGAAGGAAGAAATTCATGTATCTACCGCAGATATCCTCAACTGGGATCTTCAAACTATTCTCCGTTTTCCAACGATCAAAATTCGGGCAAGTCGAAGTAGGCTCATGGAGCAATGTTCTTATTTCCGGGGCCTCTTCCTTGGGAGCTTCAGTGAATCGTGCCTGGGCTCTACCATTGTCGAGTGGAATTTGCTACCATTTATGGACATTCTGAAGTATCTATATGGCTGCCCGTTGGAGATTACATCAGATAATTTCCTCTCTCTTTATGAGGGTGCACTTTATTTTGGTGTGGACTCACTTCTATTGAAGTGCAAAATATGGTTTTCTGATGTGTCCTCATCCAAAGGATCTCAACCAATACAGCTGCAAATGGAGGACATAATTCTAATTTGGAAATTTGGTTTGGAGCATGAAATTGATTTTATGCTGGAATTATGCACAAGCTATCTAGCAAGAAATTTTATGTGGGCATCGACTATCACTTTATTTTACAAGATTCCATATGATATGTTGTTGTCTTCTATACAGCATCCTCACCTGACTGTTGAAAGTGAAATGCATCTTTCTGATGCACTTTTACGCTGGCTTGAATGTAACTTCGAGAATGTGGAAACCTTGGGCAGAGGTGAATACAACTGTGACAGAATGTTGAAACAAATTCGTGTTGGCCTTTTGCCTTTGTGGTTTGCAGCAGGGAAAAGAAACTCTTTATTTTTCGGACAGCTTGCTGAAGAAAGCCTTGATTCAATTTTCAGACAATTAAATATTTCAACCATGGGTTCACAAAATCTTTTAGGATATGATGGCTTGCAGCATCTCAGGATTCGGCTGACAGAATATTCCAAGAAAGTGAACCTTTCTGACTGTCCCCAAATAACACCAGCAATCCTGCTTGTGTCACTGGTCCCTCTATCACCTCCAATGGACCTCGGATCAAGAAATATTATTGAGCTGCTTGAAAATAACTTTGAACACCTTATAAGAGACAAACGTGCATTCCCACAAATAATGTTGCGAACTTTGTACTTTGAAGCAGTTCAGGAGGTAGATATCTCAAAGTGTCAAAGATTGCCAATTGAATGTGCCATTGAATGCTTTTGCAAGTCCTTTCCTTCTTTAAAAATATTGAGAGCTGCTTATCTTCTGAACATCAGAACAACCAATTTTCTTCTATTAGCACTGAAGTGCCCTCAGGTCTGTGAAATTGATTTGACTGTTGACATTACTCCACTAATGCCAGCATTAGTTTCAATCATGTCATCAAGTCTTTCGGTGACATCACTGGTATCAGAGAGGGCTTCTAGTGTGAAATATGATGCTGTGGATGCCTTCTCATTCTATGAATTTGGACTACCACTTTCTAACATTACCAAGCTCACCTTGGAAGGAAGAACTGATATCTATGATTCAGATCTCCAGTACATCTCCAAAATTTGTCTTTCACTGCATCACCTGAATCTTAAAGGATGCATTTCAGTCACAGACACTGGCATATCAAATCTCATACGCAAATGTATAAAACTTTACTCAATTGTGGTTTGCGATACTTCTTTTGGGGAAAATTCAGTTCAAGCTCTTTCCTCAGCTATTTCTGATTATGCTAGCTTTTCCTCTCAACATATTAGAGACAAGCATTTGAGTTCTGTAGCATCTAACCTTCAAATCCTGCATATGGGGGGTTGCCGAGGTATAAATAAGTTGTCTCTACTCAAGCTTATGTCTCAAATGAAACTGCTGAGGGGTCTATGCTTGAGAGGGATGGACATGGTTGACCAAGCACTTTATAACTTCCCAGGTTCTTCCTTGGAGATGCTTGATGTTTCAGATACACAGATATCTGGAGCTGCATTAGCTCACATTATTCATGGAAATCCAAATTTACAGTGTCTAAAAGTTAGAGGCTGTAGTAATTTATTTCAAGAGGAAAACTGTACTGAGGAAAGAGAATCTATCTTCTCTTGTTTGCATGAAGAACTGTACACCAAGCTAGGAAAGATGTGCAAATTGGAAGAAGTTGAATTTGGATGGGGCTTTTCATCACTCTCCTTGAAAGCTATGGAACCTGCACTGATGACGTTACAGAGAATCAATGTAGGTTTAGGTGGAATGCTTGGTGAAGAAGCATTGAGAAAACTACCGGCAATTTGTCCCATGCTAGAAACAATAATATTTCAGTTTCAGGTAATATCTGATAGTGTTGTGGTGAACATAGCTACATCCTTGACAAACTTGCAAGAGCTAGCTTTGTGCTATTGTTTTGGTGATATATCCATATCAAGCTTCAAATTCTTCACGCAAAATCTTAGAAAGTTGAGGCTTCAAAGAGTAACCCCTTGGATGACCAATGATGATTTGGATATTTTGACTCAAAACTGCAGAAATTTGGTTGAACTTTCTTTATTAGGATGTCCGCTTCTTAATCCAGATTCTCAACATATAATTTCACGTGGATGGCCAGGCCTCATTTCAATCCATTTAGAGGAATGTGGAGGAATAACAGCAAATGGGGTCTCTTCTCTTTTTGACTGCAAAGCTATTGAAGATCTCCAGCTGCGTCATAATGTAGGCATTCTATTGCCTTTTCTGTATATTGATTCTTGGGAGTTTTTACTGACAAACATGATTCAGGGACCTGGGCTGCAGAAAAACTTCATTTTTGATGCTGCTTCAACGATTCCAATGCTTCGAAAGTTGTCTCTGGATATATGCGATGCAAGCAAAGGTGATTTTGACATTCCAAAAGTCCATGCAGACAGATACTTCTTGAGTAGCTTGAAGATAGCGAGATGCAAATACCAAAGATGTGCATTTAATCTCCCAGCCCCTTCCCGGGGGGTGTGTAGTAGGTCTGTGCACGTGGAGACGATGGTATTTGTATGGAACAGCAGAGATCTCACTAGAGCAGTTGTGAAGGAAAGGCTTTGA 3177 0.3997 MSENIHALLKDIANVELKLVQSPIFIHLPLQKEGVRSWVGLLTHSRGNVTLNRSHLTLSMESSSDDEHVILVCKNPDSIETETEKEEIHVSTADILNWDLQTILRFPTIKIRASRSRLMEQCSYFRGLFLGSFSESCLGSTIVEWNLLPFMDILKYLYGCPLEITSDNFLSLYEGALYFGVDSLLLKCKIWFSDVSSSKGSQPIQLQMEDIILIWKFGLEHEIDFMLELCTSYLARNFMWASTITLFYKIPYDMLLSSIQHPHLTVESEMHLSDALLRWLECNFENVETLGRGEYNCDRMLKQIRVGLLPLWFAAGKRNSLFFGQLAEESLDSIFRQLNISTMGSQNLLGYDGLQHLRIRLTEYSKKVNLSDCPQITPAILLVSLVPLSPPMDLGSRNIIELLENNFEHLIRDKRAFPQIMLRTLYFEAVQEVDISKCQRLPIECAIECFCKSFPSLKILRAAYLLNIRTTNFLLLALKCPQVCEIDLTVDITPLMPALVSIMSSSLSVTSLVSERASSVKYDAVDAFSFYEFGLPLSNITKLTLEGRTDIYDSDLQYISKICLSLHHLNLKGCISVTDTGISNLIRKCIKLYSIVVCDTSFGENSVQALSSAISDYASFSSQHIRDKHLSSVASNLQILHMGGCRGINKLSLLKLMSQMKLLRGLCLRGMDMVDQALYNFPGSSLEMLDVSDTQISGAALAHIIHGNPNLQCLKVRGCSNLFQEENCTEERESIFSCLHEELYTKLGKMCKLEEVEFGWGFSSLSLKAMEPALMTLQRINVGLGGMLGEEALRKLPAICPMLETIIFQFQVISDSVVVNIATSLTNLQELALCYCFGDISISSFKFFTQNLRKLRLQRVTPWMTNDDLDILTQNCRNLVELSLLGCPLLNPDSQHIISRGWPGLISIHLEECGGITANGVSSLFDCKAIEDLQLRHNVGILLPFLYIDSWEFLLTNMIQGPGLQKNFIFDAASTIPMLRKLSLDICDASKGDFDIPKVHADRYFLSSLKIARCKYQRCAFNLPAPSRGVCSRSVHVETMVFVWNSRDLTRAVVKERL 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0957 1058 Pfam BTB And C-terminal Kelch 213 313 IPR011705 -
Lele06g0957 1058 SMART LRR_CC_2 825 851 IPR006553 -
Lele06g0957 1058 SMART LRR_CC_2 876 901 IPR006553 -
Lele06g0957 1058 SMART LRR_CC_2 634 659 IPR006553 -
Lele06g0957 1058 SMART LRR_CC_2 800 824 IPR006553 -
Lele06g0957 1058 SMART LRR_CC_2 537 562 IPR006553 -
Lele06g0957 1058 SMART LRR_CC_2 902 927 IPR006553 -
Lele06g0957 1058 SMART LRR_CC_2 683 707 IPR006553 -
Lele06g0957 1058 SMART LRR_CC_2 563 588 IPR006553 -
Lele06g0957 1058 ProSiteProfiles BTB domain profile. 98 166 IPR000210 GO:0005515
Lele06g0957 1058 Gene3D Ribonuclease Inhibitor 491 617 IPR032675 -
Lele06g0957 1058 CDD BTB_POZ_ZBTB_KLHL-like 103 179 - -
Lele06g0957 1058 SUPERFAMILY POZ domain 104 189 IPR011333 -
Lele06g0957 1058 Gene3D Potassium Channel Kv1.1; Chain A 99 195 IPR011333 -
Lele06g0957 1058 Gene3D - 207 326 - -
Lele06g0957 1058 SUPERFAMILY RNI-like 336 616 - -
Lele06g0957 1058 SUPERFAMILY RNI-like 532 938 - -
Lele06g0957 1058 SMART BACK_2 211 319 IPR011705 -
Lele06g0957 1058 PANTHER UNCHARACTERIZED 287 724 - -
Lele06g0957 1058 Gene3D Ribonuclease Inhibitor 618 1017 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0957 Lele-ChrLele06 5891771 5908025 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0957 06 5891771 5908025 Lele08g0944 08 5943853 5955045 hybridization